Protein Alignment exd and pbx4

DIOPT Version :10

• Sequence 1: NP_523360.1
• Gene: exd / 32567
• FlyBaseID: FBgn0000611
• Length: 376
• Species: Drosophila melanogaster
• Sequence 2: NP_571522.1
• Gene: pbx4 / 30728
• ZFINID: ZDB-GENE-000201-18
• Length: 343
• Species: Danio rerio
• Alignment Length: 354
• Identity: 263/354 - (74%)
• Similarity: 291/354 - (82%)
• Gaps: 28/354 - (7%)

  Fly     1 MEDPNRMLAHTGGMMAPQGYGLSGQDDGQNAGSENEVRK-------QKDIGEILQQIMSISEQSL 58
            |:|..||||..||:     .|||..|    .|..:.|||       |:|||:||||||:|:::||
Zfish     1 MDDQTRMLASMGGL-----GGLSQAD----VGDPDSVRKQQSLGQPQQDIGDILQQIMAITDESL 56

  Fly    59 DEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGVAGPEKG 123
            ||||||||.|||||:||||||||||||||||||||..|||:|||||:|||||||:||||:|||||
Zfish    57 DEAQARKHALNCHRLKPALFSVLCEIKEKTVLSIRGVQEEDPPDPQIMRLDNMLLAEGVSGPEKG 121

  Fly   124 GGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLL 188
            ||.||||:||||: |||.:    |.:||||||||||||||||||.|||||||||:|||.||||||
Zfish   122 GGSAAAAAAAAAA-GGSPN----DGSIEHSDYRAKLAQIRQIYHSELEKYEQACSEFTNHVMNLL 181

  Fly   189 REQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEIL 253
            |||||||||:||||||||.|||:||||||||||||||||||||||||||||||||||:|||:|:|
Zfish   182 REQSRTRPISPKEIERMVAIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFNKQATEVL 246

  Fly   254 NEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKAAGA 318
            ||||||||||||||||||||||:||||||||||||||||||||||||||.||||||||.|.|..|
Zfish   247 NEYFYSHLSNPYPSEEAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAVKTAVDA 311

  Fly   319 SPYSMAGPPSGTTTPMMSPAPPQDSMGYP 347
            :..|.....:.      |||.| :|.|||
Zfish   312 ANVSAQASQAN------SPATP-NSGGYP 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
exd	NP_523360.1	PBC	42..237	CDD:461052	163/194 (84%)
		homeodomain	239..299	CDD:238039	55/59 (93%)
pbx4	NP_571522.1	PBC	40..230	CDD:461052	163/194 (84%)
		homeodomain	232..292	CDD:238039	55/59 (93%)