DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and Pbx3

DIOPT Version :9

Sequence 1:NP_001259592.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_058048.1 Gene:Pbx3 / 18516 MGIID:97496 Length:434 Species:Mus musculus


Alignment Length:412 Identity:276/412 - (66%)
Similarity:298/412 - (72%) Gaps:62/412 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDPNRML---------AHT--GGM-MAPQGYGLSGQD-DGQNAGSENEVRKQKDIGEILQQIMS 52
            |:|.:|||         .|:  ||| :.|..:|..|.| ||         ||| |||:||.|||:
Mouse     1 MDDQSRMLQTLAGVNLAGHSVQGGMALPPPPHGHEGADGDG---------RKQ-DIGDILHQIMT 55

  Fly    53 ISEQSLDEAQARKHTLNCHRMKPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGV 117
            |::||||||||:||.|||||||||||||||||||||.||||..|||:|||||||||||||:||||
Mouse    56 ITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGV 120

  Fly   118 AGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTT 182
            :|||||||.||||:|||||.|.|      ||:||||||||||.|||||||.||||||||||||||
Mouse   121 SGPEKGGGSAAAAAAAAASGGSS------DNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTT 179

  Fly   183 HVMNLLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSK 247
            |||||||||||||||:||||||||.|||:||||||||||||||||||||||||||||||||||||
Mouse   180 HVMNLLREQSRTRPISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSK 244

  Fly   248 QASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAA 312
            ||:|||||||||||||||||||||||||:||.|||||||||||||||||||||||.|||||||||
Mouse   245 QATEILNEYFYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAA 309

  Fly   313 KKAAGASPYSMAGPPSGTTTPMMSPAPPQD----SMGYPMGSG-------------------GYD 354
            |.|..|:....|...:..|.   ||..|..    |...| .||                   |.:
Mouse   310 KTAVTAAHAVAAAVQNNQTN---SPTTPNSGSSGSFNLP-NSGDMFMNMQSLNGDSYQGSQVGAN 370

  Fly   355 QQQPYD------NSMGGYDPNL 370
            .|...|      |..|||...|
Mouse   371 VQSQVDTLRHVINQTGGYSDGL 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_001259592.1 PBC 41..237 CDD:397732 165/195 (85%)
homeodomain 239..299 CDD:238039 56/59 (95%)
Pbx3NP_058048.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..41 7/20 (35%)
PBC 43..234 CDD:397732 167/197 (85%)
homeodomain 236..296 CDD:238039 56/59 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..349 7/26 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 405..434
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167842735
Domainoid 1 1.000 336 1.000 Domainoid score I1114
eggNOG 1 0.900 - - E1_KOG0774
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 499 1.000 Inparanoid score I1356
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48762
OrthoDB 1 1.010 - - D348471at33208
OrthoFinder 1 1.000 - - FOG0000743
OrthoInspector 1 1.000 - - otm43208
orthoMCL 1 0.900 - - OOG6_104641
Panther 1 1.100 - - O PTHR11850
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4561
SonicParanoid 1 1.000 - - X78
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.800

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