DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment exd and Pbx2

DIOPT Version :10

Sequence 1:NP_523360.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_059491.1 Gene:Pbx2 / 18515 MGIID:1341793 Length:430 Species:Mus musculus


Alignment Length:387 Identity:266/387 - (68%)
Similarity:294/387 - (75%) Gaps:40/387 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 AHTGGMMAPQGYGLSGQDDGQNAGSENEVRKQKDIGEILQQIMSISEQSLDEAQARKHTLNCHRM 73
            |..||...|.|    |.|.|..:|.....|.::|||:||||||:|::||||||||:||.||||||
Mouse    23 AEPGGPGEPPG----GGDPGGGSGGVPGGRGKQDIGDILQQIMTITDQSLDEAQAKKHALNCHRM 83

  Fly    74 KPALFSVLCEIKEKTVLSIRNTQEEEPPDPQLMRLDNMLIAEGVAGPEKGGGGAAAASAAAASQG 138
            |||||||||||||||.||||::|||||.|||||||||||:||||||||||||.||||:|||||.|
Mouse    84 KPALFSVLCEIKEKTGLSIRSSQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGG 148

  Fly   139 GSLSIDGADNAIEHSDYRAKLAQIRQIYHQELEKYEQACNEFTTHVMNLLREQSRTRPITPKEIE 203
            |.    ..||:|||||||:||||||.|||.||||||||||||||||||||||||||||:.|||:|
Mouse   149 GV----SPDNSIEHSDYRSKLAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEME 209

  Fly   204 RMVQIIHKKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSE 268
            |||.|||:|||:||||||||||||||||||||||||||||||||||:|:||||||||||||||||
Mouse   210 RMVSIIHRKFSAIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSE 274

  Fly   269 EAKEELARKCGITVSQVSNWFGNKRIRYKKNIGKAQEEANLYAAKKA-----AGASPYSMAGPPS 328
            |||||||:||||||||||||||||||||||||||.|||||:||.|.|     .|.|..|...|||
Mouse   275 EAKEELAKKCGITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVAQGGHSRTSSPTPPS 339

  Fly   329 GTTT----------------PMMS----PAPPQDSMGYPMGSGGYDQQQPYDNSMGG--YDP 368
            ...:                |.::    ||...:|:.:.||.|.|.     ||..||  |.|
Mouse   340 SAGSGGSFNLSGSGDMFLGMPGLNGDSYPASQVESLRHSMGPGSYG-----DNIGGGQIYSP 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_523360.1 PBC 42..237 CDD:461052 163/194 (84%)
homeodomain 239..299 CDD:238039 56/59 (95%)
Pbx2NP_059491.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..52 10/32 (31%)
PBC 52..243 CDD:461052 163/194 (84%)
PBC-A. /evidence=ECO:0000255|PROSITE-ProRule:PRU01322 55..134 67/78 (86%)
PBC-B. /evidence=ECO:0000255|PROSITE-ProRule:PRU01322 137..243 90/109 (83%)
homeodomain 245..305 CDD:238039 56/59 (95%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 327..347 6/19 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..430 10/27 (37%)

Return to query results.
Submit another query.