DRSC/TRiP Functional Genomics Resources

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Protein Alignment exd and ceh-60

DIOPT Version :9

Sequence 1:NP_001259592.1 Gene:exd / 32567 FlyBaseID:FBgn0000611 Length:376 Species:Drosophila melanogaster
Sequence 2:NP_509101.4 Gene:ceh-60 / 184803 WormBaseID:WBGene00017690 Length:360 Species:Caenorhabditis elegans


Alignment Length:353 Identity:94/353 - (26%)
Similarity:148/353 - (41%) Gaps:67/353 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 ILQQIMSISEQSLDEAQARKHTLNCHRMKPA---LFSVLCEIKE-----KTVLSIRNTQEEEPPD 102
            |.|..||:|.:::|    |.....|..|.|.   |..||.|.|:     ..::::.:|.|:....
 Worm     5 IKQLQMSVSSENVD----RNFIEKCIEMNPCRRMLHEVLLERKDILRSRMNLVALYDTDEQSSEI 65

  Fly   103 PQLM-RLDNMLIAEGVAGPEKGGGGAAAASAAAASQGGSLSIDGADNAIEHSDYRAKLAQIRQIY 166
            .::: :.:|..........||                     |.....:|    |..|..|.:|.
 Worm    66 EEILAQFENPTFPLEEVNTEK---------------------DEEWQPLE----RKYLDGINRIK 105

  Fly   167 HQELEKYEQACNEFTTHVMN---LLREQSRTRPITPKEIERMVQIIHKKFSSIQMQLKQSTCEAV 228
            ...:.|..|...:....:.|   :||.....|||..|:...:.|.|.|:|...:..::......:
 Worm   106 EDTIMKQIQLDKDMEKALTNSEEVLRNHRDFRPIDEKDFSNIRQSISKRFEHSKNNIRGEAATKI 170

  Fly   229 MILRSRFLDARRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGNKR 293
            ::||.......||||||.|..::||..:|:.|..|||||::.|.|||::|.|.:|||:|||||:|
 Worm   171 LVLRREIEQQGRKRRNFDKNTTDILQNWFHDHRQNPYPSDQEKAELAKQCNIKISQVNNWFGNQR 235

  Fly   294 IRYKKNIGKAQEEANLYAAKKA---------------AGASPYSMAGPPSGTTTPMMSPAPPQDS 343
            ||.|:...:.||:....||..|               |.:|..|.:|.   ...|:::|.  ..|
 Worm   236 IRTKQQALRMQEDERERAASMANEAQAIQNSLNSSTVASSSNMSTSGL---INIPLVNPT--MQS 295

  Fly   344 MGYP------MGSGGYDQQQPYDNSMGG 365
            |..|      :|:......||:..:.||
 Worm   296 MVIPAVQPGLLGNPNAFLHQPHYFTAGG 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
exdNP_001259592.1 PBC 41..237 CDD:397732 41/202 (20%)
homeodomain 239..299 CDD:238039 34/59 (58%)
ceh-60NP_509101.4 COG5576 138..280 CDD:227863 50/141 (35%)
Homeobox_KN 198..237 CDD:368670 22/38 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0774
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D348471at33208
OrthoFinder 1 1.000 - - FOG0000743
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
65.780

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