DRSC/TRiP Functional Genomics Resources

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Protein Alignment ND-20 and ndhK

DIOPT Version :10

Sequence 1:NP_573097.1 Gene:ND-20 / 32565 FlyBaseID:FBgn0030718 Length:221 Species:Drosophila melanogaster
Sequence 2:NP_051063.1 Gene:ndhK / 844761 -ID:- Length:225 Species:Arabidopsis thaliana


Alignment Length:151 Identity:77/151 - (50%)
Similarity:110/151 - (72%) Gaps:5/151 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TKQSSVAEWSLARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQAD 126
            ||.|.::    ..|:||.||.|..|:|||.:|.:||.:|...:...|:|.||||:|.|:||||||
plant    13 TKNSVIS----TTLNDLSNWSRLSSLWPLLYGTSCCFIEFASLIGSRFDFDRYGLVPRSSPRQAD 73

  Fly   127 VIIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY-SYSVVRGCDRIIPVDIYVPG 190
            :|:.|||:|.||||:|.::|:|||||::||:||:|...||.:.. |||.|||.|::||||:|:||
plant    74 LILTAGTVTMKMAPSLVRLYEQMPEPKYVIAMGACTITGGMFSTDSYSTVRGVDKLIPVDVYLPG 138

  Fly   191 CPPTAEALMYGVLQLQKKVKR 211
            |||..||::..:.:|:||:.|
plant   139 CPPKPEAVIDAITKLRKKIAR 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-20NP_573097.1 PRK06411 72..213 CDD:235797 74/141 (52%)
ndhKNP_051063.1 ndhK 1..225 CDD:214337 77/151 (51%)

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