DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-20 and ndufs7

DIOPT Version :9

Sequence 1:NP_001285313.1 Gene:ND-20 / 32565 FlyBaseID:FBgn0030718 Length:221 Species:Drosophila melanogaster
Sequence 2:NP_001186841.1 Gene:ndufs7 / 796997 ZFINID:ZDB-GENE-041111-261 Length:217 Species:Danio rerio


Alignment Length:220 Identity:141/220 - (64%)
Similarity:167/220 - (75%) Gaps:19/220 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LRSAMMSSTLSRALQKATQTPNASISALPALNLALVRQQQTLPVAEVAQNLPKKGYSPFGTKQSS 66
            ||:....|...:.|....:..|:|.       |...|::.|...|:.|..:..||          
Zfish    17 LRAFSSFSAHKKLLPTDCKDENSSC-------LVPFREKSTALAAKPASAVSSKG---------- 64

  Fly    67 VAEWSLARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIVA 131
              |:.:.:||||:||.|:.|:||:|||||||||||||:|||||||||:|||||||||||||:|||
Zfish    65 --EYVITKLDDLVNWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIVA 127

  Fly   132 GTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTAE 196
            ||||||||||||||||||||||:|||||||||||||||||||||||||||:||||||||||||||
Zfish   128 GTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAE 192

  Fly   197 ALMYGVLQLQKKVKRMKTLQMWYRK 221
            ||:||.||||:|:||.|.:::||||
Zfish   193 ALLYGTLQLQRKIKREKRMKIWYRK 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-20NP_001285313.1 PRK06411 72..213 CDD:235797 122/140 (87%)
ndufs7NP_001186841.1 PRK06411 67..214 CDD:235797 123/146 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170577582
Domainoid 1 1.000 220 1.000 Domainoid score I2557
eggNOG 1 0.900 - - E1_COG0377
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11535
Inparanoid 1 1.050 289 1.000 Inparanoid score I2799
OMA 1 1.010 - - QHG60686
OrthoDB 1 1.010 - - D1278656at2759
OrthoFinder 1 1.000 - - FOG0003606
OrthoInspector 1 1.000 - - otm25173
orthoMCL 1 0.900 - - OOG6_100846
Panther 1 1.100 - - LDO PTHR11995
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2669
SonicParanoid 1 1.000 - - X2960
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

Return to query results.
Submit another query.