DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-20 and Ndufs7

DIOPT Version :9

Sequence 1:NP_001285313.1 Gene:ND-20 / 32565 FlyBaseID:FBgn0030718 Length:221 Species:Drosophila melanogaster
Sequence 2:XP_038935332.1 Gene:Ndufs7 / 362837 RGDID:1310013 Length:226 Species:Rattus norvegicus


Alignment Length:221 Identity:144/221 - (65%)
Similarity:172/221 - (77%) Gaps:26/221 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SST-----LSRALQK--ATQTPNASISALPALNLALVRQQQTLPVAEVAQNLPKKGYSPFGTKQS 65
            |||     |.||.|.  ||.:|:::.||:.......|              :||..:.|     .
  Rat    25 SSTGTVAQLRRAHQSVAATGSPSSTQSAVSKAGAGAV--------------VPKPSHLP-----R 70

  Fly    66 SVAEWSLARLDDLLNWGRKGSIWPLTFGLACCAVEMMHIAAPRYDMDRYGVVFRASPRQADVIIV 130
            |.||:.:.:||||:||.|:.|:||:|||||||||||||:|||||||||:|||||||||||||:||
  Rat    71 SRAEYVVTKLDDLINWARRSSLWPMTFGLACCAVEMMHMAAPRYDMDRFGVVFRASPRQADVMIV 135

  Fly   131 AGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIIPVDIYVPGCPPTA 195
            |||||||||||||||||||||||:|:|||||||||||||||||||||||||:|||||||||||||
  Rat   136 AGTLTNKMAPALRKVYDQMPEPRYVVSMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTA 200

  Fly   196 EALMYGVLQLQKKVKRMKTLQMWYRK 221
            |||:||:||||:|:||.:.|::|||:
  Rat   201 EALLYGILQLQRKIKREQKLKIWYRR 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-20NP_001285313.1 PRK06411 72..213 CDD:235797 121/140 (86%)
Ndufs7XP_038935332.1 PRK06411 76..226 CDD:235797 124/149 (83%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338181
Domainoid 1 1.000 224 1.000 Domainoid score I2471
eggNOG 1 0.900 - - E1_COG0377
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11535
Inparanoid 1 1.050 289 1.000 Inparanoid score I2724
OMA 1 1.010 - - QHG60686
OrthoDB 1 1.010 - - D1278656at2759
OrthoFinder 1 1.000 - - FOG0003606
OrthoInspector 1 1.000 - - otm44571
orthoMCL 1 0.900 - - OOG6_100846
Panther 1 1.100 - - LDO PTHR11995
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2960
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1514.810

Return to query results.
Submit another query.