DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or88a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524348.2 Gene:Or88a / 41715 FlyBaseID:FBgn0038203 Length:401 Species:Drosophila melanogaster


Alignment Length:468 Identity:79/468 - (16%)
Similarity:156/468 - (33%) Gaps:158/468 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 TESSRPWRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTEN---CCTTFMGVLN 89
            ||..:|:|.:..|..       .:...|...:.:|  :..|.:.:.::....   |.:.|:.||.
  Fly     4 TEIKKPYRMEEFLRP-------QMFQEVAQMVHFQ--WRRNPVDNSMVNASMVPFCLSAFLNVLF 59

  Fly    90 F-------------------------------VRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNN 123
            |                               :|.:.|.|.:::..:.:              |:
  Fly    60 FGCNGWDIIGHFWLGHPANQNPPVLSITIYFSIRGLMLYLKRKEIVEFV--------------ND 110

  Fly   124 VAAECRRRMV---------TFSIMTSLLACLII-------MYCVLPLVEIFFGPAFDAQNKPFPY 172
            :..||.|.:|         |:.........:.|       |:||:||.  .|....:.::.|.  
  Fly   111 LDRECPRDLVSQLDMQMDETYRNFWQRYRFIRIYSHLGGPMFCVVPLA--LFLLTHEGKDTPV-- 171

  Fly   173 KMIFPYDAQ-----SSWIR---------YVMTYIFTSYAGICVVTTLFAEDTILGFFIT----YT 219
                   ||     ..|:.         |::.:.|......|.|:          ||:|    :.
  Fly   172 -------AQHEQLLGGWLPCGVRKDPNFYLLVWSFDLMCTTCGVS----------FFVTFDNLFN 219

  Fly   220 CGQFHLLHQ--RIAGLFAGSNAELAESIQLER-----LKRIVEKHNNIISFAKRLEDFFNPILLA 277
            ..|.||:..  .:|..|  |..:..:|:..|:     |:.:|::...:....::..|.|....|.
  Fly   220 VMQGHLVMHLGHLARQF--SAIDPRQSLTDEKRFFVDLRLLVQRQQLLNGLCRKYNDIFKVAFLV 282

  Fly   278 NLMISSVLICMVGFQIVTGKNMFIGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYEC 342
            :..:.:..:|...|.:....::.|  ..::|:.....:...:.:|..|..|.|.|          
  Fly   283 SNFVGAGSLCFYLFMLSETSDVLI--IAQYILPTLVLVGFTFEICLRGTQLEKAS---------- 335

  Fly   343 QWEGSDRIEIQSFTPTTKRIRNQIW---------FMILCS---QQPVRITAFKFSTLSLQSFTAI 395
              ||.:           ..:|:|.|         |.:|.:   |:..::.||....:::..||.|
  Fly   336 --EGLE-----------SSLRSQEWYLGSRRYRKFYLLWTQYCQRTQQLGAFGLIQVNMVHFTEI 387

  Fly   396 LSTSISYFTLLRS 408
            :..:...||.|:|
  Fly   388 MQLAYRLFTFLKS 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 67/407 (16%)
Or88aNP_524348.2 7tm_6 75..392 CDD:251636 62/378 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472833
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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