DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or85c

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524280.2 Gene:Or85c / 41008 FlyBaseID:FBgn0037591 Length:389 Species:Drosophila melanogaster


Alignment Length:426 Identity:94/426 - (22%)
Similarity:173/426 - (40%) Gaps:100/426 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 YIVWAWYVIASVGI---TISYQT--AFLLNNL---SDIIITTENCCTTFMGVLNFVRLIHLRL-- 98
            ::.:|.:...||||   ||..::  |.|.::|   :::|         .:.|:.|..:::|.:  
  Fly     3 FMKYAVFFYTSVGIEPYTIDSRSKKASLWSHLLFWANVI---------NLSVIVFGEILYLGVAY 58

  Fly    99 NQRKFRQLIENFSY------------EIWIPNSSKNNVAAE-----------------------C 128
            :..||...:...||            .||...:..:::..|                       |
  Fly    59 SDGKFIDAVTVLSYIGFVIVGMSKMFFIWWKKTDLSDLVKELEHIYPNGKAEEEMYRLDRYLRSC 123

  Fly   129 RRRMVTFSIMTSLLACLIIMYCVL------PLVEIFFGPAFDAQNKPFPYKMIFPYDAQSSWIRY 187
            .|..:|::::.|:|.....::.::      .|::|      ....:..||.|.||::...:|..|
  Fly   124 SRISITYALLYSVLIWTFNLFSIMQFLVYEKLLKI------RVVGQTLPYLMYFPWNWHENWTYY 182

  Fly   188 VMTYIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQLER--- 249
            |:.:. .::||....:...:.|.:|....|.....|..|            |.:.|...|:|   
  Fly   183 VLLFC-QNFAGHTSASGQISTDLLLCAVATQVVMHFDYL------------ARVVEKQVLDRDWS 234

  Fly   250 -----LKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGFQIVTGKNMFIGDYVKFII 309
                 |.:.|:.|..|:.....|.|.|...||.|.|:|:.:||.||||:..|....|  .:|..:
  Fly   235 ENSRFLAKTVQYHQRILRLMDVLNDIFGIPLLLNFMVSTFVICFVGFQMTVGVPPDI--MIKLFL 297

  Fly   310 YISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQ 374
            ::.|:|||:|::|..|..:...|:..:...|:..|:.:|           .|.|..:.|.|...|
  Fly   298 FLFSSLSQVYLICHYGQLIADASSSLSISAYKQNWQNAD-----------IRYRRALVFFIARPQ 351

  Fly   375 QPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSVY 410
            :...:.|..|..::..:.|.:|..|..:|.|||::|
  Fly   352 RTTYLKATIFMNITRATMTDLLQVSYKFFALLRTMY 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 77/371 (21%)
Or85cNP_524280.2 7tm_6 63..377 CDD:251636 73/345 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45472827
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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