DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or13a and Or83c

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524244.2 Gene:Or83c / 40744 FlyBaseID:FBgn0037399 Length:397 Species:Drosophila melanogaster


Alignment Length:391 Identity:70/391 - (17%)
Similarity:143/391 - (36%) Gaps:65/391 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 WYVIASVGITISYQTAFLLNNLSDIIITTENCCTT---FMGVLNFVRLIHLRLNQRKFRQLIENF 110
            |..|.::.....:....:|||..|..:..:....|   |.|:..|:..:   |..:..|:|: .:
  Fly    41 WTTIFAIANYTGFTVFTILNNGGDWRVGLKASLMTGGLFHGLGKFLTCL---LKHQDMRRLV-LY 101

  Fly   111 SYEIWIPNSSKNNVAAECRRRMVT------FSIMTSLLACLIIMYC---VLPLVEIFF-GPAFDA 165
            |..|:    .:.....:...|.:.      ..||..:....:..:|   :|||..:.: |....|
  Fly   102 SQSIY----DEYETRGDSYHRTLNSNIDRLLGIMKIIRNGYVFAFCLMELLPLAMLMYDGTRVTA 162

  Fly   166 QNKPFPYKMIFPYDAQSSWIRYVMTYIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLLHQRI 230
            .....|     ....::::. ||:||:..:...:......::.|..:...:|.......:|..::
  Fly   163 MQYLIP-----GLPLENNYC-YVVTYMIQTVTMLVQGVGFYSGDLFVFLGLTQILTFADMLQVKV 221

  Fly   231 AGLFAGSNAELAESIQLERLKRI---VEKHNN-------IISFAKRLEDFFNPI------LLANL 279
            ..|    |..|.:..:...|.|:   ::...|       :|.:.:...|:...|      |:|..
  Fly   222 KEL----NDALEQKAEYRALVRVGASIDGAENRQRLLLDVIRWHQLFTDYCRAINALYYELIATQ 282

  Fly   280 MISSVLICMVGFQIVTGKNMFIGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQW 344
            ::|..|..|:.|.|    |:........|.::.||.| :.:.|..|..|        :..|:..:
  Fly   283 VLSMALAMMLSFCI----NLSSFHMPSAIFFVVSAYS-MSIYCILGTIL--------EFAYDQVY 334

  Fly   345 EGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAI--LSTSISYFTLLR 407
            |....:.....:...:::   ..|::..||.|..|......:||:::...|  |..|:|...:.|
  Fly   335 ESICNVTWYELSGEQRKL---FGFLLRESQYPHNIQILGVMSLSVRTALQIVKLIYSVSMMMMNR 396

  Fly   408 S 408
            :
  Fly   397 A 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 61/351 (17%)
Or83cNP_524244.2 7tm_6 69..387 CDD:251636 61/351 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465552
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.