DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Orco

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001097687.1 Gene:Orco / 40650 FlyBaseID:FBgn0037324 Length:486 Species:Drosophila melanogaster


Alignment Length:479 Identity:88/479 - (18%)
Similarity:181/479 - (37%) Gaps:163/479 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 VIASVGIT-ISYQTAFLL----------NNLSDIIITT---ENCCTTFMGVLNFVRLIHLRLNQR 101
            |.:||.:. :..|..|:|          |.||...|||   .:|.|.|         |:|.:||:
  Fly    44 VYSSVHLVFLLMQFTFILVNMALNAEEVNELSGNTITTLFFTHCITKF---------IYLAVNQK 99

  Fly   102 KFRQLIENF----SYEIWIPNSSKNNVAAECRRRMVTFSIMTSLLACLIIMYCVLPLVEIFFG-- 160
            .|.:.:..:    ::.::..:.::.:..|..:.|.:.|.:|.:.:|.......:     .|||  
  Fly   100 NFYRTLNIWNQVNTHPLFAESDARYHSIALAKMRKLFFLVMLTTVASATAWTTI-----TFFGDS 159

  Fly   161 ----------PAFDAQNKPFPYKMIFPYDAQSSWIRYVMTYIFTSY--------AGICVVTTLFA 207
                      .:...:....|.|..:|::| |..:.|::::.|..|        :.:|       
  Fly   160 VKMVVDHETNSSIPVEIPRLPIKSFYPWNA-SHGMFYMISFAFQIYYVLFSMIHSNLC------- 216

  Fly   208 EDTILGFFITYTCGQF-------------------------------------HLLHQR------ 229
             |.:...::.:.|.|.                                     .|:|..      
  Fly   217 -DVMFCSWLIFACEQLQHLKGIMKPLMELSASLDTYRPNSAALFRSLSANSKSELIHNEEKDPGT 280

  Fly   230 ---IAGLFA------------------------------GSN----AELAESIQLERLKRIVEKH 257
               ::|:::                              |:|    .:..|.:....:|..||:|
  Fly   281 DMDMSGIYSSKADWGAQFRAPSTLQSFGGNGGGGNGLVNGANPNGLTKKQEMMVRSAIKYWVERH 345

  Fly   258 NNIISFAKRLEDFFNPILLANLMISSVLICMVGFQI--VTGKNMFIGDYVKFIIYISSALSQLYV 320
            .:::.....:.|.:...||.:::.|::.:.::.:|.  :.|.|::....|.::.|   ||:|::.
  Fly   346 KHVVRLVAAIGDTYGAALLLHMLTSTIKLTLLAYQATKINGVNVYAFTVVGYLGY---ALAQVFH 407

  Fly   321 LCENGDALIKQSTLTAQILYECQW-EGSDRIEIQSFTPTTKRIRNQIWFMILCS--QQPVRITAF 382
            .|..|:.||::|:...:..|.|.| :||:  |.::|.            .|:|.  |:.:.|:..
  Fly   408 FCIFGNRLIEESSSVMEAAYSCHWYDGSE--EAKTFV------------QIVCQQCQKAMSISGA 458

  Fly   383 KFSTLSLQSFTAILSTSISYFTLL 406
            ||.|:||..|.::|...::||.:|
  Fly   459 KFFTVSLDLFASVLGAVVTYFMVL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 73/429 (17%)
OrcoNP_001097687.1 7tm_6 70..472 CDD:251636 78/441 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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