DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or13a and Or83a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524234.2 Gene:Or83a / 40648 FlyBaseID:FBgn0037322 Length:453 Species:Drosophila melanogaster


Alignment Length:461 Identity:91/461 - (19%)
Similarity:171/461 - (37%) Gaps:124/461 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 QSLLATAYIVWAWYV----IASVGITISYQTAFLLNNLSDIIITTENCCTTFM----GVLNF--- 90
            |::...|...:.:||    :.:|.:.....|..|.|....:.|.....||.::    |.|:|   
  Fly    25 QTMCIAAMYPFGYYVNGSGVLAVLVRFCDLTYELFNYFVSVHIAGLYICTIYINYGQGDLDFFVN 89

  Fly    91 --------VRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNNVAAECR-RRMVTFS---------- 136
                    :..|.::|..|:||.         .:.|:..:|:..|.. |..|.||          
  Fly    90 CLIQTIIYLWTIAMKLYFRRFRP---------GLLNTILSNINDEYETRSAVGFSFVTMAGSYRM 145

  Fly   137 ----IMTSLLACLI--IMYCVLPLVEIFFGPAFDAQNKPFPYKMIFPYDAQSSWIRYVMTYIFTS 195
                |.|.:..|.|  |.:..||:.         .:::..|....:|:|.....: |.:.::..:
  Fly   146 SKLWIKTYVYCCYIGTIFWLALPIA---------YRDRSLPLACWYPFDYTQPGV-YEVVFLLQA 200

  Fly   196 YAGICVVTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGS----NAELAESIQL--------- 247
            ...|.|..:..:...:.........||:.:|...:..:.|.|    .|.:.|..||         
  Fly   201 MGQIQVAASFASSSGLHMVLCVLISGQYDVLFCSLKNVLASSYVLMGANMTELNQLQAEQSAADV 265

  Fly   248 ----------------ERLK----------------RIVEKHNNIISFAKRLEDFFNPILLANLM 280
                            |.||                |.::.|..|::..|::|.|::||....:.
  Fly   266 EPGQYAYSVEEETPLQELLKVGSSMDFSSAFRLSFVRCIQHHRYIVAALKKIESFYSPIWFVKIG 330

  Fly   281 ISSVLICMVGFQIV--TGKNMF-----IGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQI 338
            ..:.|:|:|.|...  |..|.|     :|.|:..::|      :|:::|...|.:.:.|....:.
  Fly   331 EVTFLMCLVAFVSTKSTAANSFMRMVSLGQYLLLVLY------ELFIICYFADIVFQNSQRCGEA 389

  Fly   339 LYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYF 403
            |:...|:..           .|.:|:...|.:|.|::..::||.|.|.|::..|...::|:.|:.
  Fly   390 LWRSPWQRH-----------LKDVRSDYMFFMLNSRRQFQLTAGKISNLNVDRFRGTITTAFSFL 443

  Fly   404 TLLRSV 409
            |||:.:
  Fly   444 TLLQKM 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 77/404 (19%)
Or83aNP_524234.2 7tm_6 <155..440 CDD:251636 59/311 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2E3WB
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D84425at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.