DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or71a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_524078.2 Gene:Or71a / 39641 FlyBaseID:FBgn0036474 Length:378 Species:Drosophila melanogaster


Alignment Length:421 Identity:80/421 - (19%)
Similarity:160/421 - (38%) Gaps:97/421 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 WLKLNGSWPLTES-SRP----WRSQSL---LATAYIVWAWY-VIASVGITISYQTAFLLNNLSDI 73
            |.:|   ||..|| |.|    |::.:|   ....:::..|. .|.|..|          .:.:|:
  Fly    18 WWRL---WPRKESVSTPDWTNWQAYALHVPFTFLFVLLLWLEAIKSRDI----------QHTADV 69

  Fly    74 IITTENC-CTTFMG--VLNFVRLIHLR-----------LNQRKFRQLIENFSYEIWIPNSSKNNV 124
            ::.   | .||.:|  |:|..:..|:.           |.:.:.:|.::.:.:|           
  Fly    70 LLI---CLTTTALGGKVINIWKYAHVAQGILSEWSTWDLFELRSKQEVDMWRFE----------- 120

  Fly   125 AAECRRRMVTFSIMTSLLACLIIMYC-----VLPLVEIFFGPAFDAQNKPFPYKMIFPYDAQSS- 183
                .||...          :.:.||     |:|.:.|  .|.||..|: .|:.|..|:|.|.. 
  Fly   121 ----HRRFNR----------VFMFYCLCSAGVIPFIVI--QPLFDIPNR-LPFWMWTPFDWQQPV 168

  Fly   184 --WIRYVMTYIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQ 246
              |..::........|..|.||.    |.:..:.:.:......:|.||::.| ...:.:|.    
  Fly   169 LFWYAFIYQATTIPIACACNVTM----DAVNWYLMLHLSLCLRMLGQRLSKL-QHDDKDLR---- 224

  Fly   247 LERLKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGFQI-VTGKNMFIGDYVKFIIY 310
             |:...::..|..:...|..:|.|.:......:::||::||...:.: ::.....:..:...:.|
  Fly   225 -EKFLELIHLHQRLKQQALSIEIFISKSTFTQILVSSLIICFTIYSMQMSPVLQDLPGFAAMMQY 288

  Fly   311 ISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQ 375
            :.:.:.|:.:....|:|:|..:.:....:|...|...:           .|:|..:...::...:
  Fly   289 LVAMIMQVMLPTIYGNAVIDSANMLTDSMYNSDWPDMN-----------CRMRRLVLMFMVYLNR 342

  Fly   376 PVRITAFKFSTLSLQSFTAILSTSISYFTLL 406
            ||.:.|..|..:.|..||..::.:.|...||
  Fly   343 PVTLKAGGFFHIGLPLFTKTMNQAYSLLALL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 62/343 (18%)
Or71aNP_524078.2 7tm_6 68..367 CDD:251636 63/350 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466212
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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