DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or59c

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster


Alignment Length:418 Identity:89/418 - (21%)
Similarity:161/418 - (38%) Gaps:98/418 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LATAYIVWAWYVIASVGITISY--------QTAFLLNNLSDIIITTENC-------CTTFMGVLN 89
            |.|...:|...|...:|::::|        .|.||.:...||     ||       |.|:..:..
  Fly    50 LWTLTTMWLGIVYLPLGLSLTYVKHFDRFTPTEFLTSLQVDI-----NCIGNVIKSCVTYSQMWR 109

  Fly    90 FVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNNVAAECRR---RMVT-FSIMTSLLACLIIMYC 150
            |          |:..:||.:.         .|..|....||   :||. .:::..|.....:.:|
  Fly   110 F----------RRMNELISSL---------DKRCVTTTQRRIFHKMVARVNLIVILFLSTYLGFC 155

  Fly   151 VLPL-VEIFFGPAFDAQNKPFPYKMIFP-YDAQSS----WIRYVMTYIFTSYAGICVVT-----T 204
            .|.| ..:|.|.|        |:::..| .|.:..    ||..::.|        |||:     .
  Fly   156 FLTLFTSVFAGKA--------PWQLYNPLVDWRKGHWQLWIASILEY--------CVVSIGTMQE 204

  Fly   205 LFAEDTILGFFITYTCGQFHL--LHQRIAGLFAGSNAELAESIQLERLKRIVEKHNNIISFAKRL 267
            |.::...:.|...:.|   ||  |..|||.|  ..:.:|:|....|::...::.|..||..::.:
  Fly   205 LMSDTYAIVFISLFRC---HLAILRDRIANL--RQDPKLSEMEHYEQMVACIQDHRTIIQCSQII 264

  Fly   268 EDFFNPILLANLMISSVLICMVGFQIVTGKNMF--IGDYVKFIIYISSALSQLYVLCENGDALIK 330
            ....:..:.|..|:..:.:.:....|:...|..  |...|.||:.|.:......:|||:   ||:
  Fly   265 RPILSITIFAQFMLVGIDLGLAAISILFFPNTIWTIMANVSFIVAICTESFPCCMLCEH---LIE 326

  Fly   331 QSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAI 395
            .|...:..|:...|..:||           ..::.:.:.:..:|||::.||.....:|:||..|:
  Fly   327 DSVHVSNALFHSNWITADR-----------SYKSAVLYFLHRAQQPIQFTAGSIFPISVQSNIAV 380

  Fly   396 LSTSISYFTLLRSV-----YFDDEKKLD 418
            ...:.:..|::..:     :|.|....|
  Fly   381 AKFAFTIITIVNQMNLGEKFFSDRSNGD 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 74/346 (21%)
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 79/364 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465973
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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