DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or56a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:402 Identity:87/402 - (21%)
Similarity:162/402 - (40%) Gaps:68/402 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 WRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTENCCTTFMGVLNFVRLIHLRL 98
            |.|.:|:...  |:..|...:.|.| ||.||.....:|   |...|.......|::.:|:.|..:
  Fly    55 WLSCALMLAR--VFRGYENLNDGAT-SYATAVQYFAVS---IAMFNAYVQRDKVISLLRVAHSDI 113

  Fly    99 -------NQRKFRQLIENFSYE------IWIPNSSKNNVAAECRRRMVTFSIMTSLLACLIIMYC 150
                   :.|:...|:...:|.      ||||                  |::..|:|....:|.
  Fly   114 QNLMHEADNREMELLVATQAYTRTITLLIWIP------------------SVIAGLMAYSDCIYR 160

  Fly   151 VLPLVE-IFFGPAF-DAQNKPFPYKMIFPYDAQSSWIRYVMTYIFTSYAGICVVTTLFAEDTILG 213
            .|.|.: :|..||. ..:..|.....:||:.....  .:|:.|:...||....:|.:....|.:.
  Fly   161 SLFLPKSVFNVPAVRRGEEHPILLFQLFPFGELCD--NFVVGYLGPWYALGLGITAIPLWHTFIT 223

  Fly   214 FFITYTCGQFHLLHQRIAGL-FAGSNAEL------AESI---QLERLKRIVEKHNNIISFAKRLE 268
            ..:.|...:..:|::|:..: ....|::|      |..:   |::..|..|::...|..|.:.|:
  Fly   224 CLMKYVNLKLQILNKRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQ 288

  Fly   269 DFFNPILLANLMISSVLICMVGFQIVTG--KNMFIGDYVKFIIYISSALSQLYVLCENGDALIKQ 331
            ......::|:.:|.|||||.:.|.:..|  ..|   ||....||:......|::...:...:::.
  Fly   289 YLICVPVMADFIIFSVLICFLFFALTVGVPSKM---DYFFMFIYLFVMAGILWIYHWHATLIVEC 350

  Fly   332 STLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAIL 396
            ....:...:.|.|...:           ..::..:.||::.:|:|:::.|. ...|:|::|..|.
  Fly   351 HDELSLAYFSCGWYNFE-----------MPLQKMLVFMMMHAQRPMKMRAL-LVDLNLRTFIDIG 403

  Fly   397 STSISYFTLLRS 408
            ..:.|||.||||
  Fly   404 RGAYSYFNLLRS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 67/347 (19%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 62/315 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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