DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or56a

DIOPT Version :10

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523796.2 Gene:Or56a / 37269 FlyBaseID:FBgn0034473 Length:419 Species:Drosophila melanogaster


Alignment Length:402 Identity:87/402 - (21%)
Similarity:162/402 - (40%) Gaps:68/402 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 WRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTENCCTTFMGVLNFVRLIHLRL 98
            |.|.:|:...  |:..|...:.|.| ||.||.....:|   |...|.......|::.:|:.|..:
  Fly    55 WLSCALMLAR--VFRGYENLNDGAT-SYATAVQYFAVS---IAMFNAYVQRDKVISLLRVAHSDI 113

  Fly    99 -------NQRKFRQLIENFSYE------IWIPNSSKNNVAAECRRRMVTFSIMTSLLACLIIMYC 150
                   :.|:...|:...:|.      ||||                  |::..|:|....:|.
  Fly   114 QNLMHEADNREMELLVATQAYTRTITLLIWIP------------------SVIAGLMAYSDCIYR 160

  Fly   151 VLPLVE-IFFGPAF-DAQNKPFPYKMIFPYDAQSSWIRYVMTYIFTSYAGICVVTTLFAEDTILG 213
            .|.|.: :|..||. ..:..|.....:||:.....  .:|:.|:...||....:|.:....|.:.
  Fly   161 SLFLPKSVFNVPAVRRGEEHPILLFQLFPFGELCD--NFVVGYLGPWYALGLGITAIPLWHTFIT 223

  Fly   214 FFITYTCGQFHLLHQRIAGL-FAGSNAEL------AESI---QLERLKRIVEKHNNIISFAKRLE 268
            ..:.|...:..:|::|:..: ....|::|      |..:   |::..|..|::...|..|.:.|:
  Fly   224 CLMKYVNLKLQILNKRVEEMDITRLNSKLVIGRLTASELTFWQMQLFKEFVKEQLRIRKFVQELQ 288

  Fly   269 DFFNPILLANLMISSVLICMVGFQIVTG--KNMFIGDYVKFIIYISSALSQLYVLCENGDALIKQ 331
            ......::|:.:|.|||||.:.|.:..|  ..|   ||....||:......|::...:...:::.
  Fly   289 YLICVPVMADFIIFSVLICFLFFALTVGVPSKM---DYFFMFIYLFVMAGILWIYHWHATLIVEC 350

  Fly   332 STLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAIL 396
            ....:...:.|.|...:           ..::..:.||::.:|:|:::.|. ...|:|::|..|.
  Fly   351 HDELSLAYFSCGWYNFE-----------MPLQKMLVFMMMHAQRPMKMRAL-LVDLNLRTFIDIG 403

  Fly   397 STSISYFTLLRS 408
            ..:.|||.||||
  Fly   404 RGAYSYFNLLRS 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 67/347 (19%)
Or56aNP_523796.2 7tm_6 126..407 CDD:251636 62/315 (20%)

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