DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or13a and Or47a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster


Alignment Length:395 Identity:93/395 - (23%)
Similarity:184/395 - (46%) Gaps:58/395 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 RPWRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTENCCT---TFMGVLNFVRL 93
            ||:|:.::.:.|.|.  .:::|:|           |:|..::::..:....   |.:|:..|..:
  Fly    29 RPYRAMNVFSIAAIF--PFILAAV-----------LHNWKNVLLLADAMVALLITILGLFKFSMI 80

  Fly    94 IHLRLNQRKFRQLIENFSYEIWIPNSSKN--------NVAAECRRRMVTFSIMTSLLACLIIMYC 150
            ::||   |.|::||:.|  .:.:.|.::.        |.|.:..:||.|.     ...|.::.:.
  Fly    81 LYLR---RDFKRLIDKF--RLLMSNEAEQGEEYAEILNAANKQDQRMCTL-----FRTCFLLAWA 135

  Fly   151 ---VLPLVEIFFGPAFDAQNKP-FPYKMIFPYDAQSSWIR-YVMTYIFTSYAGICVVTTLFAEDT 210
               |||||.:..........:| .|:..:||::...  || ||:::|::::|...||....:.||
  Fly   136 LNSVLPLVRMGLSYWLAGHAEPELPFPCLFPWNIHI--IRNYVLSFIWSAFASTGVVLPAVSLDT 198

  Fly   211 ILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQLERLKRIVEKHNNIISFAKRLEDFFNPIL 275
            |...|.:..|..|.:...::.....||   |.||  ...|.::...:...:.....|...:.||:
  Fly   199 IFCSFTSNLCAFFKIAQYKVVRFKGGS---LKES--QATLNKVFALYQTSLDMCNDLNQCYQPII 258

  Fly   276 LANLMISSVLICMVG--FQIVTGKNMFIGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQI 338
            .|...|||:.:||:|  |.|...:.    :.|.:..:|::.:.|.|:.|..|:.|..:|......
  Fly   259 CAQFFISSLQLCMLGYLFSITFAQT----EGVYYASFIATIIIQAYIYCYCGENLKTESASFEWA 319

  Fly   339 LYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYF 403
            :|:..|..|    :.:...:|...|: :...::.:.:..|||.:.|.. ::::|::|:.|::||.
  Fly   320 IYDSPWHES----LGAGGASTSICRS-LLISMMRAHRGFRITGYFFEA-NMEAFSSIVRTAMSYI 378

  Fly   404 TLLRS 408
            |:|||
  Fly   379 TMLRS 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 77/338 (23%)
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 78/345 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465678
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.