DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or43b

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523656.2 Gene:Or43b / 35743 FlyBaseID:FBgn0026393 Length:403 Species:Drosophila melanogaster


Alignment Length:390 Identity:81/390 - (20%)
Similarity:145/390 - (37%) Gaps:74/390 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 VWAWY------VIASVGITISY-------QTAFLLNNLSDIIITTENCCTTFMGVLNFVRLI--- 94
            :|..:      ||..|...|:|       ....||.:|       :.|..|:...|.|..||   
  Fly    47 IWRVFSFTYNMVILPVSFPINYVIHLAEFPPELLLQSL-------QLCLNTWCFALKFFTLIVYT 104

  Fly    95 -HLRLNQRKFRQLIENFSYEIWIPNSSKNNVAAECRRRMVTFSIMTSLLACLIIMYCVLPLVEIF 158
             .|.|..:.|.:|     .:..:..:.|..|     |.||  :.:|.|....:::|.:.....:.
  Fly   105 HRLELANKHFDEL-----DKYCVKPAEKRKV-----RDMV--ATITRLYLTFVVVYVLYATSTLL 157

  Fly   159 FGPAFDAQNKPFPYKMIFPY-----DAQSSWIRYVMTYIFTSYAGICVVTTLFAEDTILGFFITY 218
            .|    ..:...||...:|:     |....:|:..:.|....|| |.|.|   |.|:....::..
  Fly   158 DG----LLHHRVPYNTYYPFINWRVDRTQMYIQSFLEYFTVGYA-IYVAT---ATDSYPVIYVAA 214

  Fly   219 TCGQFHLLHQRIAGLFAGSNAELAE-SIQLERLKRIVEKHNNIISFAKRLEDFFNPILLANLMIS 282
            ......||..||..|...||...:: |...:.|...::.|..:::|...::...:..:.|..:|.
  Fly   215 LRTHILLLKDRIIYLGDPSNEGSSDPSYMFKSLVDCIKAHRTMLNFCDAIQPIISGTIFAQFIIC 279

  Fly   283 SVLICMVGFQIVTGKNMFIGDYVKF--IIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWE 345
            ..::.::...:|    :|.....:|  :||:.:.|.|.:.||...:|::......|..|:...|.
  Fly   280 GSILGIIMINMV----LFADQSTRFGIVIYVMAVLLQTFPLCFYCNAIVDDCKELAHALFHSAWW 340

  Fly   346 GSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSVY 410
            ..|           ||.:..:...:...|||:..||       :..|...|:|:|:......:||
  Fly   341 VQD-----------KRYQRTVIQFLQKLQQPMTFTA-------MNIFNINLATNINVAKFAFTVY 387

  Fly   411  410
              Fly   388  387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 68/332 (20%)
Or43bNP_523656.2 7tm_6 95..384 CDD:251636 68/330 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465934
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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