DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or43a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster


Alignment Length:420 Identity:81/420 - (19%)
Similarity:149/420 - (35%) Gaps:88/420 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VWLKLNGSWPLTESSRPWR---------SQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSD 72
            :|..|...:|...||  ||         :.:|:...|::..|..:          .||:||..  
  Fly    15 MWRHLAVLYPTPGSS--WRKFAFVLPVTAMNLMQFVYLLRMWGDL----------PAFILNMF-- 65

  Fly    73 IIITTENCCTTFMGVLN-FVRLIHLRLNQRKFRQLIENF---------SYEIWIPNSSKNNVAAE 127
                      .|..:.| .:|...:.:.:|:|.:.:...         |.:.| ..........|
  Fly    66 ----------FFSAIFNALMRTWLVIIKRRQFEEFLGQLATLFHSILDSTDEW-GRGILRRAERE 119

  Fly   128 CRRRMVTFSIMTSLLACLIIMYCVLPLVEIFFGPAFDAQNKPFPYKMIFPYDAQSSWIRYVMTYI 192
            .|.           ||.|.:....|.:|.....|.| .:.:..|:.:..|..:.:|...|.:.|:
  Fly   120 ARN-----------LAILNLSASFLDIVGALVSPLF-REERAHPFGLALPGVSMTSSPVYEVIYL 172

  Fly   193 FTSYAGICV------VTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQLERLK 251
            ......:.:      ..:|||...|.|      .....:|..|: |...|.  |.:|..:.:||.
  Fly   173 AQLPTPLLLSMMYMPFVSLFAGLAIFG------KAMLQILVHRL-GQIGGE--EQSEEERFQRLA 228

  Fly   252 RIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGF--QIVTGKNMFIGDYVKFIIYISSA 314
            ..:..|..::.:..:|......|:....:|...:||.:.|  .|:|.....|    ..::||.:.
  Fly   229 SCIAYHTQVMRYVWQLNKLVANIVAVEAIIFGSIICSLLFCLNIITSPTQVI----SIVMYILTM 289

  Fly   315 LSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRI 379
            |..|:......:.:..::...|:.:|...|..:.           .|.|..:...::.:|.|:.|
  Fly   290 LYVLFTYYNRANEICLENNRVAEAVYNVPWYEAG-----------TRFRKTLLIFLMQTQHPMEI 343

  Fly   380 TAFKFSTLSLQSFTAILSTSISYFTLLRSV 409
            .......::|..|.::|:.|.||||:||.|
  Fly   344 RVGNVYPMTLAMFQSLLNASYSYFTMLRGV 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 59/338 (17%)
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 63/366 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466136
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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