DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or42b

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster


Alignment Length:441 Identity:79/441 - (17%)
Similarity:152/441 - (34%) Gaps:99/441 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PLTESSRP---------------WRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDI-- 73
            ||||..|.               |.........|:...|.::..|..|......||.:.::.|  
  Fly    10 PLTEQKRSRDGCIYLYRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKS 74

  Fly    74 -----IITTENCCTTFMGVLNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKN---NVAAEC-- 128
                 .:|:...|....|....|.:.:..|                |....:||   .:...|  
  Fly    75 FSPGEFLTSLQVCINAYGSSVKVAITYSML----------------WRLIKAKNILDQLDLRCTA 123

  Fly   129 --RRRMVTFSIMTSLLACLI--IMYCVLPLVEIFFGPAFDA---QNKPFPYKMIFPY-----DAQ 181
              .|..:...:..|..|.||  .:||.      :.|..:.:   ..:| |:::..|:     ...
  Fly   124 MEEREKIHLVVARSNHAFLIFTFVYCG------YAGSTYLSSVLSGRP-PWQLYNPFIDWHDGTL 181

  Fly   182 SSWIRYVMTYIFTSYAGICVVTTLFAEDTILGFF-ITYTC---GQFHLLHQRIAGLFAGSNAELA 242
            ..|:...:.|:..|.|.:        :|.:...: :.||.   ....:|.:||..|.:..|...|
  Fly   182 KLWVASTLEYMVMSGAVL--------QDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEA 238

  Fly   243 ESIQLERLKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMV-GFQIVTGKNMF----IG 302
            ||  .|.|.:.|..|..|:.:..    ...|::...:....:||.:| ||.::   |:|    |.
  Fly   239 ES--YEELVKCVMDHKLILRYCA----IIKPVIQGTIFTQFLLIGLVLGFTLI---NVFFFSDIW 294

  Fly   303 DYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIW 367
            ..:...:::.:.|.|.:..|...:.:::........:::..|..:.|           |.:..:.
  Fly   295 TGIASFMFVITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASR-----------RYKTTLL 348

  Fly   368 FMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSVYFDDEKKLD 418
            :.:...|||:...|.....:|:.|..::...:.|..|:.:.:...|:.|.|
  Fly   349 YFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQMNIADKFKTD 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 60/346 (17%)
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 61/355 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465960
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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