DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or42a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523622.2 Gene:Or42a / 35514 FlyBaseID:FBgn0033041 Length:406 Species:Drosophila melanogaster


Alignment Length:414 Identity:70/414 - (16%)
Similarity:155/414 - (37%) Gaps:104/414 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 AYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTENCCTTFMGVLNFVR--LIHL-RLNQRKFR 104
            ||::|::.:                           |.|:||...:.|:.  :.|| ..:..:|.
  Fly    47 AYVLWSFAL---------------------------NFCSTFYQPIGFLTGYISHLSEFSPGEFL 84

  Fly   105 QLIENFSYEIWIPNS-------------SKNNVAAECRRRMV----------TFSIMTSLLACLI 146
            ..:: .::..|..::             ..||:..|..||:.          ..|:...:....:
  Fly    85 TSLQ-VAFNAWSCSTKVLIVWALVKRFDEANNLLDEMDRRITDPGERLQIHRAVSLSNRIFFFFM 148

  Fly   147 IMYCVLP----LVEIFFGPAFDAQNKPFPYKMIFPY-DAQSSWIRYVMT--YIFTSYAGICVVTT 204
            .:|.|..    |..||.|       :| ||:..:|: |.:||.:...:.  ..:.:.||.|.   
  Fly   149 AVYMVYATNTFLSAIFIG-------RP-PYQNYYPFLDWRSSTLHLALQAGLEYFAMAGACF--- 202

  Fly   205 LFAEDTILGF----FITYTCGQFHLLHQRIAGLFAGSNAELAESIQLERLKRIVEKHNNIISFAK 265
               :|..:..    |:........:..:|:..|  |:....::..:.|||.:.::.|..|:.|. 
  Fly   203 ---QDVCVDCYPVNFVLVLRAHMSIFAERLRRL--GTYPYESQEQKYERLVQCIQDHKVILRFV- 261

  Fly   266 RLEDFFNPILLANLMISSVLICMV-GFQIVTGKNMF----IGDYVKFIIYISSALSQLYVLCENG 325
               |...|::...:.:..:::.:| ||.::   |:.    :|..:..:.::::.|.:....|...
  Fly   262 ---DCLRPVISGTIFVQFLVVGLVLGFTLI---NIVLFANLGSAIAALSFMAAVLLETTPFCILC 320

  Fly   326 DALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQ 390
            :.|.:.....|..|::..|...:           ||.:..:.:.:...|||:...|.....:|:.
  Fly   321 NYLTEDCYKLADALFQSNWIDEE-----------KRYQKTLMYFLQKLQQPITFMAMNVFPISVG 374

  Fly   391 SFTAILSTSISYFTLLRSVYFDDE 414
            :..::...|.|.|||::.:...::
  Fly   375 TNISVTKFSFSVFTLVKQMNISEK 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 62/362 (17%)
Or42aNP_523622.2 7tm_6 79..384 CDD:251636 55/339 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465921
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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