DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or30a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523520.2 Gene:Or30a / 34236 FlyBaseID:FBgn0032096 Length:377 Species:Drosophila melanogaster


Alignment Length:438 Identity:96/438 - (21%)
Similarity:161/438 - (36%) Gaps:107/438 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LSFPIQCVWLKLNGSWPLTESSRPWRSQSLLATAYIVWAWYVIAS----VGITISYQTA-FLLNN 69
            :..||....|||...|... ....||       .|:....|:|.:    |.|.:|.::. |::.|
  Fly     9 VEMPIFGSTLKLMKFWSYL-FVHNWR-------RYVAMTPYIIINCTQYVDIYLSTESLDFIIRN 65

  Fly    70 LSDIIITTENCCTTFMGVLNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNNV-AAECRRRMV 133
            :...::.|.   |...|||..|:    |.:..:|..::::|..|:...:....|: ..|..|..|
  Fly    66 VYLAVLFTN---TVVRGVLLCVQ----RFSYERFINILKSFYIELLQSDDPIINILVKETTRLSV 123

  Fly   134 TFSIMTSLL-ACLIIMYCVLPLVEIFFGPAFDAQNKPFPYKMIFP----YDAQSSW------IRY 187
            ..|.:..|: .|..|.:...|:    ||     ..:..||.|..|    |...|.:      |:.
  Fly   124 LISRINLLMGCCTCIGFVTYPI----FG-----SERVLPYGMYLPTIDEYKYASPYYEIFFVIQA 179

  Fly   188 VMT----YIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQLE 248
            :|.    .::..|..:.|..||||                 :|..|:                |:
  Fly   180 IMAPMGCCMYIPYTNMVVTFTLFA-----------------ILMCRV----------------LQ 211

  Fly   249 RLKRIVEKHNN---------IISFAKRLEDFFNP-------ILLANLMISSVLICMVGFQIVTGK 297
            ...|.:||..|         .|.:..:|..|.:.       :.|...:....::|::.|.::..:
  Fly   212 HKLRSLEKLKNEQVRGEIIWCIKYQLKLSGFVDSMNALNTHLHLVEFLCFGAMLCVLLFSLIIAQ 276

  Fly   298 NMFIGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRI 362
            .  |...|..|.|:....:...||....:.|..||...|...||..|...|       ..|.|.:
  Fly   277 T--IAQTVIVIAYMVMIFANSVVLYYVANELYFQSFDIAIAAYESNWMDFD-------VDTQKTL 332

  Fly   363 RNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSVY 410
            :    |:|:.||:|:.|.......::|:...::|:...|:|||||.||
  Fly   333 K----FLIMRSQKPLAILVGGTYPMNLKMLQSLLNAIYSFFTLLRRVY 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 71/352 (20%)
Or30aNP_523520.2 7tm_6 58..366 CDD:251636 74/369 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466149
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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