DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or24a

DIOPT Version :10

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:434 Identity:96/434 - (22%)
Similarity:175/434 - (40%) Gaps:73/434 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SYPYKALSFPIQCVWLKLNGSWPLTESSRP-----WRSQSLLATAYIVW--AWYVIASVGITISY 61
            |||.:...|.:....|.|.|.:|  |..|.     |...:.....|..:  |:|.|..:.|.|: 
  Fly     9 SYPMERHYFMVPKFALSLIGFYP--EQKRTVLVKLWSFFNFFILTYGCYAEAYYGIHYIPINIA- 70

  Fly    62 QTAFLLNNLSDIIITTENCCTTFMGVLNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNNVAA 126
             ||.            :..|.....:|:.|:::.:...|.:.|.|||...:   :....|:....
  Fly    71 -TAL------------DALCPVASSILSLVKMVAIWWYQDELRSLIERVRF---LTEQQKSKRKL 119

  Fly   127 ECRRRMVTFSIMTSLLA-----CLIIMYCVLPLVEIFFGPAFDAQNKPF----PYKMIFPYDAQS 182
            ..::|..|.:...:.|.     |....|.|..|::....   ....|.:    |:||:|| |...
  Fly   120 GYKKRFYTLATQLTFLLLCCGFCTSTSYSVRHLIDNILR---RTHGKDWIYETPFKMMFP-DLLL 180

  Fly   183 SWIRYVMTYIFTSYAG-ICVVTTLFAEDTILGFFITYT----CGQFHLLHQRIAGLFAGSNAEL- 241
            ....|.:|||...:.| |.||..:.|:...|||.:.:|    |     |...:..|....|.|. 
  Fly   181 RLPLYPITYILVHWHGYITVVCFVGADGFFLGFCLYFTVLLLC-----LQDDVCDLLEVENIEKS 240

  Fly   242 ---AESIQLER-LKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLI--CMVGFQIVTGKNMF 300
               ||..::.| ::::|::||.:....:||......|.||:.:.||::|  .:|...:.:|..:.
  Fly   241 PSEAEEARIVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFSGLGII 305

  Fly   301 IGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQ 365
            :     :::|..:...::::.|..|..:::..:..|:..:...|.|.. :.:|..|         
  Fly   306 V-----YVVYTCAVGVEIFLYCLGGSHIMEACSNLARSTFSSHWYGHS-VRVQKMT--------- 355

  Fly   366 IWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSV 409
              .:::...|.|......|.:.||::.|:||..:.|...|.:||
  Fly   356 --LLMVARAQRVLTIKIPFFSPSLETLTSILRFTGSLIALAKSV 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 73/341 (21%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 76/362 (21%)

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