DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or24a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523470.3 Gene:Or24a / 33623 FlyBaseID:FBgn0026394 Length:398 Species:Drosophila melanogaster


Alignment Length:434 Identity:96/434 - (22%)
Similarity:176/434 - (40%) Gaps:73/434 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SYPYKALSFPIQCVWLKLNGSWPLTESSRP-----WRSQSLLATAYIVW--AWYVIASVGITISY 61
            |||.:...|.:....|.|.|.:|  |..|.     |...:.....|..:  |:|.|..:.|.|: 
  Fly     9 SYPMERHYFMVPKFALSLIGFYP--EQKRTVLVKLWSFFNFFILTYGCYAEAYYGIHYIPINIA- 70

  Fly    62 QTAFLLNNLSDIIITTENCCTTFMGVLNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKNNVAA 126
             ||.            :..|.....:|:.|:::.:...|.:.|.|||...:   :....|:....
  Fly    71 -TAL------------DALCPVASSILSLVKMVAIWWYQDELRSLIERVRF---LTEQQKSKRKL 119

  Fly   127 ECRRRMVTFSIMTSLLA-----CLIIMYCVLPLVEIFF----GPAFDAQNKPFPYKMIFPYDAQS 182
            ..::|..|.:...:.|.     |....|.|..|::...    |..:..:.   |:||:|| |...
  Fly   120 GYKKRFYTLATQLTFLLLCCGFCTSTSYSVRHLIDNILRRTHGKDWIYET---PFKMMFP-DLLL 180

  Fly   183 SWIRYVMTYIFTSYAG-ICVVTTLFAEDTILGFFITYT----CGQFHLLHQRIAGLFAGSNAEL- 241
            ....|.:|||...:.| |.||..:.|:...|||.:.:|    |     |...:..|....|.|. 
  Fly   181 RLPLYPITYILVHWHGYITVVCFVGADGFFLGFCLYFTVLLLC-----LQDDVCDLLEVENIEKS 240

  Fly   242 ---AESIQLER-LKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLI--CMVGFQIVTGKNMF 300
               ||..::.| ::::|::||.:....:||......|.||:.:.||::|  .:|...:.:|..:.
  Fly   241 PSEAEEARIVREMEKLVDRHNEVAELTERLSGVMVEITLAHFVTSSLIIGTSVVDILLFSGLGII 305

  Fly   301 IGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQ 365
            :     :::|..:...::::.|..|..:::..:..|:..:...|.|.. :.:|..|         
  Fly   306 V-----YVVYTCAVGVEIFLYCLGGSHIMEACSNLARSTFSSHWYGHS-VRVQKMT--------- 355

  Fly   366 IWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSV 409
              .:::...|.|......|.:.||::.|:||..:.|...|.:||
  Fly   356 --LLMVARAQRVLTIKIPFFSPSLETLTSILRFTGSLIALAKSV 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 73/341 (21%)
Or24aNP_523470.3 7tm_6 68..388 CDD:251636 76/362 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465356
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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