DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or22c

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_523454.2 Gene:Or22c / 33381 FlyBaseID:FBgn0026396 Length:402 Species:Drosophila melanogaster


Alignment Length:425 Identity:113/425 - (26%)
Similarity:188/425 - (44%) Gaps:88/425 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GSWPLT---ESSRPWRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITTENCCTTF 84
            |.||..   ...|||.:..|...|:   |..|:.:|| .:||...    :|.::::..|..|...
  Fly    25 GLWPQRIRGGGGRPWHAHLLFVFAF---AMVVVGAVG-EVSYGCV----HLDNLVVALEAFCPGT 81

  Fly    85 MGVLNFVRL-IHLRLNQRKFRQLIENFSYEIWIPNSSKNNVAAECRRRMVTFSIMTSLLACLII- 147
            ...:..::| :..|.| |::.:|::.....:|   .|:..   |.:|.:|..:...:.|:.|:: 
  Fly    82 TKAVCVLKLWVFFRSN-RRWAELVQRLRAILW---ESRRQ---EAQRMLVGLATTANRLSLLLLS 139

  Fly   148 -------MYCVLPLV--------------EIFFG---PAFDAQNKPFPYKMIFPYDAQSSWIRYV 188
                   .:.:.||:              |:.|.   |:|..|...||                 
  Fly   140 SGTATNAAFTLQPLIMGLYRWIVQLPGQTELPFNIILPSFAVQPGVFP----------------- 187

  Fly   189 MTYIFTSYAGICVVTTLFAEDTILGFFI---TYTCGQFHLLHQRIAGLFA---GSNAEL-AESIQ 246
            :||:..:.:|.|   |:||...:.||||   .|.||.|.|:.|.|..:||   |.:.:: .|.:.
  Fly   188 LTYVLLTASGAC---TVFAFSFVDGFFICSCLYICGAFRLVQQDIRRIFADLHGDSVDVFTEEMN 249

  Fly   247 LE---RLKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGFQIVTGKNMFIGDYVKFI 308
            .|   ||.::||:||.||.|...|...|..|:|.:.:.::.::|.....|:...:...|  :.:|
  Fly   250 AEVRHRLAQVVERHNAIIDFCTDLTRQFTVIVLMHFLSAAFVLCSTILDIMLNTSSLSG--LTYI 312

  Fly   309 IYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCS 373
            .||.:||:||::.|..|:.:.:.|...|.:||:.:|...|           .|.|..| .|||..
  Fly   313 CYIIAALTQLFLYCFGGNHVSESSAAVADVLYDMEWYKCD-----------ARTRKVI-LMILRR 365

  Fly   374 QQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRS 408
            .|..:..|..|.|.||.:..:||||:.||.|||::
  Fly   366 SQRAKTIAVPFFTPSLPALRSILSTAGSYITLLKT 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 92/356 (26%)
Or22cNP_523454.2 7tm_6 69..392 CDD:251636 93/363 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465317
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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