DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or9a

DIOPT Version :10

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_511107.1 Gene:Or9a / 31975 FlyBaseID:FBgn0030204 Length:392 Species:Drosophila melanogaster


Alignment Length:420 Identity:96/420 - (22%)
Similarity:173/420 - (41%) Gaps:81/420 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 QCVWLKLNGSW-PLTESSRPWRSQSLLATAYIVWA-WYVIASVGITISYQTAFLLNNLSDIIITT 77
            :|:.:.|   | |...:.|||.:...:...::... .::.|...||   |.:.|.:.|.      
  Fly    25 RCMGIDL---WSPTMANDRPWLTFVTMGPLFLFMVPMFLAAHEYIT---QVSLLSDTLG------ 77

  Fly    78 ENCCTTFMGVLNFVRLIHLRLNQRKFRQLIENF------SYEIWIPNSSKNNVAAECRRRMVTFS 136
                :||..:|..|:.:....::::|..||.:.      ..|:| |::          |.::...
  Fly    78 ----STFASMLTLVKFLLFCYHRKEFVGLIYHIRAILAKEIEVW-PDA----------REIIEVE 127

  Fly   137 IMTSLLACLIIMYCVLPLVEIFFGPAFDAQNKPF-----------------PYKMIFPYDAQSSW 184
            ..:..:..|....| ..|..||      |..|||                 |:..::|||.|...
  Fly   128 NQSDQMLSLTYTRC-FGLAGIF------AALKPFVGIILSSIRGDEIHLELPHNGVYPYDLQVVM 185

  Fly   185 IRYVMTYIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQLER 249
            . ||.||::...|....||.....|::|.||....|..|.:...|:..|.|....|     :||.
  Fly   186 F-YVPTYLWNVMASYSAVTMALCVDSLLFFFTYNVCAIFKIAKHRMIHLPAVGGKE-----ELEG 244

  Fly   250 LKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGFQIVTGKNMFIG-DYVKFIIYISS 313
            |.:::..|...:..|..:.|.:.|::.....:|::.||.:|||:.   ::|.. ..:.||.::.|
  Fly   245 LVQVLLLHQKGLQIADHIADKYRPLIFLQFFLSALQICFIGFQVA---DLFPNPQSLYFIAFVGS 306

  Fly   314 ALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQQPVR 378
            .|..|::..:.|:.:...|......|||..|        ..|:|.|||   .:....:.:|:|.:
  Fly   307 LLIALFIYSKCGENIKSASLDFGNGLYETNW--------TDFSPPTKR---ALLIAAMRAQRPCQ 360

  Fly   379 ITAFKFSTLSLQSFTAILSTSISYFTLLRS 408
            :..:.|.. |:.:|:.|:.:::||..:|||
  Fly   361 MKGYFFEA-SMATFSTIVRSAVSYIMMLRS 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 78/344 (23%)
Or9aNP_511107.1 7tm_6 68..381 CDD:251636 81/361 (22%)

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