DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or13a and Or2a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_525046.1 Gene:Or2a / 31207 FlyBaseID:FBgn0023523 Length:397 Species:Drosophila melanogaster


Alignment Length:422 Identity:89/422 - (21%)
Similarity:158/422 - (37%) Gaps:90/422 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 WPLTESSRPWRSQSLLATAYIVWAWYVIASVGITISYQTAFLLNNLSDIIITT------ENCCTT 83
            |.||...||....|||         ||:.|:.:.:.....|.|:.|:.::.||      ||...|
  Fly    22 WELTGLMRPPGVSSLL---------YVVYSITVNLVVTVLFPLSLLARLLFTTNMAGLCENLTIT 77

  Fly    84 FMGV---LNFVRLIHLRLNQRKFRQLIENFSYEIWIPNSSKN--------NVAAECRRRMVTFSI 137
            ...:   |.|..:..:|....:.|.|:........:....:.        |:|....|...:..:
  Fly    78 ITDIVANLKFANVYMVRKQLHEIRSLLRLMDARARLVGDPEEISALRKEVNIAQGTFRTFASIFV 142

  Fly   138 MTSLLACLIIMYCVLPLVEIFFGPAFDAQNKPFPYKMIFPYDAQSSWIRYVMTYIFTSYAGICVV 202
            ..:.|:|:.::  |.|..|:.: ||:            |..|...|...||:..|:..:..|...
  Fly   143 FGTTLSCVRVV--VRPDRELLY-PAW------------FGVDWMHSTRNYVLINIYQLFGLIVQA 192

  Fly   203 TTLFAEDTILGFFITYTCGQFHLLHQRIAGLFAGSNAELAESIQ-------------LERLKRIV 254
            ....|.|:....|:....|....|..|:..:  |...|.:...|             :|.::.:.
  Fly   193 IQNCASDSYPPAFLCLLTGHMRALELRVRRI--GCRTEKSNKGQTYEAWREEVYQELIECIRDLA 255

  Fly   255 EKHNNIISFAKRLEDFFNPIL----LANLMISSVLICMVGFQIVTGKNMFIGD------YVKFII 309
            ..|        ||.:....:|    :|..:.|:.:.|.|....     :::.|      .:..|:
  Fly   256 RVH--------RLREIIQRVLSVPCMAQFVCSAAVQCTVAMHF-----LYVADDHDHTAMIISIV 307

  Fly   310 YISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSFTPTTKRIRNQIWFMILCSQ 374
            :.|:...:::|:|..||.:..||.......|:|.|       |:.. |..||   ::.|.:..:|
  Fly   308 FFSAVTLEVFVICYFGDRMRTQSEALCDAFYDCNW-------IEQL-PKFKR---ELLFTLARTQ 361

  Fly   375 QPVRITAFKFSTLSLQSFTAILSTSISYFTLL 406
            :|..|.|..:..|||::|..::..:.|.||||
  Fly   362 RPSLIYAGNYIALSLETFEQVMRFTYSVFTLL 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 68/354 (19%)
Or2aNP_525046.1 7tm_6 66..387 CDD:251636 68/361 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465908
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_2E3WB
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.