DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or13a and Or1a

DIOPT Version :9

Sequence 1:NP_523359.2 Gene:Or13a / 32562 FlyBaseID:FBgn0030715 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:380 Identity:77/380 - (20%)
Similarity:150/380 - (39%) Gaps:65/380 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 ITISYQ----TAFLLNNLSDIIITTENCCTTFMGVLNFV-RLIHLRLNQRKFRQLIENFSYEIWI 116
            :|.|::    .||::.|.:.|::    |....|..|..| .|:.:.:...|...|:: ...:|..
  Fly    46 LTTSFELCTVCAFMVQNRNQIVL----CSEALMHGLQMVSSLLKMAIFLAKSHDLVD-LIQQIQS 105

  Fly   117 PNSSKNNVAAECRRRMVTFSIMTSLLACLIIMYCVLPLVEIFFGPA------FDAQNKPFP---Y 172
            |.:.::.|..|.|.:    :....|:|.:..|.|....|.....|.      :.:..:..|   :
  Fly   106 PFTEEDLVGTEWRSQ----NQRGQLMAAIYFMMCAGTSVSFLLMPVALTMLKYHSTGEFAPVSSF 166

  Fly   173 KMIFPYDAQSSWIRY-----VMTYIFTSYAGICVVTTLFAEDTILGFFITYTCGQFHLLHQ---R 229
            :::.|||.....: |     :|.::.:.:   |..||  ..||:.|:.......|:..|.|   |
  Fly   167 RVLLPYDVTQPHV-YAMDCCLMVFVLSFF---CCSTT--GVDTLYGWCALGVSLQYRRLGQQLKR 225

  Fly   230 IAGLFAGSNAELAESIQLERLKRIVEKHNNIISFAKRLEDFFNPILLANLMISSVLICMVGFQIV 294
            |...|..|.::..       |..|..:|..::...:.....|..|....::|...|.|.|..|.:
  Fly   226 IPSCFNPSRSDFG-------LSGIFVEHARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYI 283

  Fly   295 ---TGKNM-FIGDYVKFIIYISSALSQLYVLCENGDALIKQSTLTAQILYECQWEGSDRIEIQSF 355
               |.:|. |:| :...::     .:||.:.....:.:..::...:::|||.       |..|:.
  Fly   284 MPHTNQNFAFLG-FFSLVV-----TTQLCIYLFGAEQVRLEAERFSRLLYEV-------IPWQNL 335

  Fly   356 TPTTKRIRNQIWFMILCSQQPVRITAFKFSTLSLQSFTAILSTSISYFTLLRSVY 410
            .|..:::   ..|.|..:|:...:.|: |..|.......|..|:.|:.||:.::|
  Fly   336 PPKHRKL---FLFPIERAQRETVLGAY-FFELGRPLLVWIFRTAGSFTTLMNALY 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or13aNP_523359.2 7tm_6 78..399 CDD:251636 66/342 (19%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 64/331 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465730
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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