DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and adam23a

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_001923262.2 Gene:adam23a / 794175 ZFINID:ZDB-GENE-070810-2 Length:785 Species:Danio rerio


Alignment Length:845 Identity:251/845 - (29%)
Similarity:377/845 - (44%) Gaps:136/845 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ILIIAQLCVFVTSAGEADYTLDDSFWNE---ESPVGEVERLLKEYRQNQELVRRIGGHYYQIIYP 70
            :.::|.:.:.|.|:.....|:..|..||   :..|.|..|  :....:.....:.|.|...|.||
Zfish     7 LCLLASIIISVPSSIATSSTVSSSVQNEALRDQHVSETPR--EATAPDDSTEGKTGEHPVTITYP 69

  Fly    71 VQLRH----------HEKMGISTREVSLPKPGQRPRPHDDSGFNRGRTKKHFHRTSLLIKAFNHK 125
            .:|.:          |:   :.||..:....||               ..|..:.|..:.||...
Zfish    70 SRLIYYLNEESESTFHD---LDTRAKNQAGDGQ---------------DVHLAQASFQLDAFGTT 116

  Fly   126 FRLDLELNSQLLSPNIQQKHYH-------VGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCN 183
            |.|||.||:.|||.:..:.||.       .||          |||||||.|:....:.||..|||
Zfish   117 FTLDLTLNNDLLSSDYIEIHYENDKPVLSRGG----------EHCYYHGHVRGKEDSRAALSTCN 171

  Fly   184 GVSGVIHIGNETFVIHP---FYGGDLSKHPHVIFEARTKANKGCANSGNLDSWR----------- 234
            |:.|:...||..::|.|   .:..:....||.:   |..::.|..:..  |.|.           
Zfish   172 GLHGMFDDGNFVYLIEPQKQTHTAETEARPHTL---RRTSSLGLTSIP--DDWTADDPDEEKRIF 231

  Fly   235 -----LSRRTKHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRNGSTRAEV 294
                 |.||.|...                  .|::.|..||:|..|:.|...|.|..  ::...
Zfish   232 ASMPWLKRRRKRAM------------------PRNIFEEMKYLEIMIVADHNTFKKHR--SKKHT 276

  Fly   295 IHDAIQVANIADLYFR-TLNTRVSVVYIETWGKNQAVIDGSKDISKAISNFNDYTSRNLFQIERD 358
            .:.|..:.|:.|..|: .|||||.:|.:|.|.....:....|.: :.:.:|:.|..:|: .|..|
Zfish   277 RNTAKSLVNLVDAIFKEQLNTRVVLVAVEIWTDKDRIPLSVKPL-EMLKDFSKYRQQNI-NINAD 339

  Fly   359 TTQLLTGETFAGGEAGMAVPETVCT-PRAVGISVDVNVYEPHLLAGTMAHMIGHNIGMGHDDG-- 420
            ...|.|..||..|.:.:.....||: .|.:|::...|.:   .:||..:..:..|:|:..|..  
Zfish   340 AVHLFTNMTFHYGRSSVGYIGGVCSKARGIGVNEFGNTW---TMAGFFSQSLAQNLGIQWDPSLR 401

  Fly   421 REECFCRD-WHGCIMAQSIVGQENVQ-PYKFSECSKKDYIDALRTGHGLCLLNKPNEIELRRNCG 483
            |:||.|.| |.||||..:     .|| |.|||:||..||.:.|..|...||.||||::.....||
Zfish   402 RKECGCMDSWLGCIMEDT-----GVQHPRKFSKCSITDYRNFLLRGGASCLFNKPNKLFEATECG 461

  Fly   484 NKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCD-QCRLRPKDYICRDSNNECDL 547
            |..||..||||||...||..| ||.  .|.|.:.|.|:.|.||: .|...|:.|.||.:.|:||:
Zfish   462 NGYVEVGEECDCGARMECYKD-CCK--KCSLSNGAHCSDGPCCNGTCLFYPRGYSCRFAVNDCDI 523

  Fly   548 PEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQF 612
            .|.|.|:.||||.::.|::|..|.|::    |.|:.|.|.|...||:.|||.....:::.|||:.
Zfish   524 SETCSGDSGQCPPNLHKQDGYSCQLNQ----GRCYSGECKTRESQCKYIWGPKAGGSEKHCYEKL 584

  Fly   613 NSKGSINGHCGRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKA 677
            |::|:..|:||||.:: ::.|...:|.||.|.|....|.|....:....:.|..:.:|:..:|  
Zfish   585 NTEGTEKGNCGRDGDK-WVPCSKHDVFCGYLLCSSTGRIPRIGTLKGDVTPTTFNHQGRLVDC-- 646

  Fly   678 TSGQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLECSEHGVCTNTNR 742
            :.|.|..:...:.|.|:||||||.:::||.:.|:.: ..::.|.||:...|..||.||||.|...
Zfish   647 SGGHVLLDDDTDLGYVEDGTPCGPSMMCLERKCLPI-SSLNLTACPSGPGGRVCSSHGVCNNEAT 710

  Fly   743 CFCDMGWGGNDCSSVVLLTTALPTEALPTPENTIKMEKKETPYGTSDQNR-ISTLTMVIILTVIV 806
            |.||..|.|.|||             :..|.....:.:...|.|.|..|. |.::...|::..||
Zfish   711 CTCDATWAGTDCS-------------MHDPPKEPPVIEDPGPKGPSATNLIIGSIAGAILMAAIV 762

  Fly   807  806
            Zfish   763  762

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 38/119 (32%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 64/206 (31%)
Disintegrin 488..561 CDD:459709 34/73 (47%)
ACR 566..713 CDD:214743 47/146 (32%)
adam23aXP_001923262.2 Pep_M12B_propep 97..202 CDD:460254 38/129 (29%)
Reprolysin 254..451 CDD:426256 65/208 (31%)
Disintegrin 466..537 CDD:459709 34/73 (47%)
ACR 541..682 CDD:214743 47/147 (32%)

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