DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and adam12

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_001035103.1 Gene:adam12 / 677729 XenbaseID:XB-GENE-982139 Length:925 Species:Xenopus tropicalis


Alignment Length:885 Identity:284/885 - (32%)
Similarity:398/885 - (44%) Gaps:164/885 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LILIIAQLCV---FVTSAGEADYTLDDSFWNEESPVGEVERLLKEYRQNQELVRRIGGHYYQIIY 69
            |.|:|..||:   .:.|..:.:               .||..|:..||..|..:.   .:|:||.
 Frog    15 LHLLILLLCLSWGVIPSQAQGE---------------NVEGKLESSRQQTEKEKH---EHYEIIV 61

  Fly    70 PVQLRHHEKMGISTREVSLPKPGQRPRPHDDSGFNRGRTKKHFHRTSLLIKAFNHKFRLDLELNS 134
            |..||..|...|.:  ||                    ||.|.....:|:||.:.:..:.||.|.
 Frog    62 PYLLRGEEWEAIGS--VS--------------------TKSHPPAMKVLLKAKDIRLLISLERNK 104

  Fly   135 QLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNGVSGVIHIGNETFVIH 199
            .|.:.|....||...|..|....:..:||||||.|:.|..:|.:..:|:|:.|:|.:.|..:|:.
 Frog   105 GLFAGNFSTTHYTEDGVFVSTALNYTDHCYYHGKVEGYSESSVSVSSCSGLRGLITLENRAYVLE 169

  Fly   200 PFYGGDLSKHPHVIFEA-RTKANKG-CANSGNLDSWRLSRRTKHLSAGVAGVVEEILQAGVGRNK 262
            |......|   |:.::| ..|...| |:...||....||...:|            .|....|:|
 Frog   170 PQANSTTS---HLFYQAEHLKLISGSCSQHFNLSGVSLSDNFQH------------SQDTFKRHK 219

  Fly   263 RDVREATKYIETAIIVDKAMFDKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVYIETWGKN 327
            ||..:.|||:|..|:.|...: :|.|....:|.|..|.:||..|.:||.||.||::|.:|.|.  
 Frog   220 RDTVKTTKYVELVIVADNREY-QRQGKDVDKVKHRLIGMANYVDKFFRPLNIRVALVGVEIWS-- 281

  Fly   328 QAVIDGSK-----DISKAISNFNDYTSRNLF-QIERDTTQLLTGETFAGGEAGMAVPETVCT-PR 385
                |..|     |....:..|.|:....|. |...|..||::|..|.|...|||...::|| .:
 Frog   282 ----DSDKCSITQDPFTTLQEFLDWRKLKLLPQKPHDNAQLVSGVYFQGTTIGMAPIMSMCTADK 342

  Fly   386 AVGISVDVNVYEPHLLAGTMAHMIGHNIGMGHDDGREECFCR---DWHGCIMAQSIVGQENVQPY 447
            :.||.:| :...|...|.|:||.:|||.||.||.....|.||   |..||||..|     ...|:
 Frog   343 SGGIVMD-HSGNPLGAAVTLAHELGHNFGMNHDTLERGCNCRGSADNGGCIMTPS-----TAYPF 401

  Fly   448 K--FSECSKKDYIDALRTGHGLCLLNKPNEIEL--RRNCGNKVVEEDEECDCGTFEECALDQCCD 508
            .  ||.|.|||...:|..|.|:||.|.|...|.  .:.|||..|||.|:||||..:||. :.||:
 Frog   402 PTVFSSCGKKDLDSSLEKGVGMCLYNMPEVTESFGEQKCGNGYVEEGEQCDCGEPDECT-NPCCN 465

  Fly   509 GITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLS 573
            ...|.||..|.||.|.||:.|:|:|....|||:||.|||||:|.|....||::|:..:|.||   
 Frog   466 ASLCMLKPGAVCAHGLCCEDCKLKPAGTPCRDANNFCDLPEFCSGTSAHCPANVYLHDGHPC--- 527

  Fly   574 KTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANEHYIKCEPENV 638
             ..|.|||:.|.|.|...||..:||.|...|...|:|:.||.|...|:||:|:...:.|||..:.
 Frog   528 -FKIEGYCYNGVCQTHEQQCITLWGQGAKPAPGICFERVNSAGDPYGNCGKDSTGSFTKCENRDA 591

  Fly   639 QCGTLQCKDGERQPVNDGIDQLYSRTIISI-KGQEFECKATSGQVGSNSYPEHGLVKDGTPCGDN 702
            :||.:||:.|..:|| .|.:.:...|.|.: :|:...|:.|...:| :..|:.|||..||.|.:.
 Frog   592 KCGKIQCQGGANRPV-IGTNAVSIETNIPLQEGRRILCRGTHVYLG-DDLPDPGLVLAGTKCEEG 654

  Fly   703 LICLNQTC--VSLFPHVDQTKCPANSQGLECSEHGVCTNTNRCFCDMGW----------GGNDCS 755
            .||||:.|  :|:|...|   |     .|:|..||||.|...|.|:..|          ||:..|
 Frog   655 KICLNRKCQNISIFGVHD---C-----ALKCHGHGVCNNKKNCHCEAEWAPPFCDKHGFGGSVDS 711

  Fly   756 SVVLLTTALPTEALPTPENTIKMEKKETPYGTSDQNRISTLTMVIILTVIVKCVFISFATLAVCY 820
            ..|.|                            ..|| |.:|.:|   |.:.|:|:  |...|..
 Frog   712 GPVRL----------------------------HDNR-SLITGMI---VTIGCIFL--AAFIVYL 742

  Fly   821 RRKT----------TTLKYDPPYSKKPIAKSYGGAATAPN 850
            :|||          ||::     ..:.:..|.||.:..||
 Frog   743 KRKTLFQWLFSNKKTTIE-----KLRSVRPSRGGCSNEPN 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 33/109 (30%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 76/212 (36%)
Disintegrin 488..561 CDD:459709 37/72 (51%)
ACR 566..713 CDD:214743 54/149 (36%)
adam12NP_001035103.1 Pep_M12B_propep 58..181 CDD:460254 42/147 (29%)
Reprolysin 227..429 CDD:426256 77/214 (36%)
DISIN 446..520 CDD:214490 37/74 (50%)
ACR 523..665 CDD:214743 54/147 (37%)
PHA03247 <781..924 CDD:223021
Blue background indicates that the domain is not in the aligned region.

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