DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mmd and adam33

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_012819411.2 Gene:adam33 / 677728 XenbaseID:XB-GENE-988107 Length:913 Species:Xenopus tropicalis


Alignment Length:797 Identity:244/797 - (30%)
Similarity:382/797 - (47%) Gaps:116/797 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 RTSLLIKAFNHKFRLDLELNSQLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAA 178
            |..:|:.:...:..|.:|.|.:|.:|...:.|| ..|.:|..:.:..|||||||.|:.|..:|.|
 Frog    62 RGEILVTSEGRRLILKVERNHRLFAPGYTETHY-TDGQMVTLSPNHTEHCYYHGQVQGYDDSSVA 125

  Fly   179 FHTCNGVSGVIHI-GNETFVIHPFYGGDLS-KHPHVIFEARTKANKG--CANSGNLDSWRLSRRT 239
            ..||:|:||:|.: .|:::.:.|.   ::| |..|.:........||  |.:.|           
 Frog   126 LTTCSGISGLIVLRTNDSYYLSPL---EVSGKETHSLVRTEHLPIKGGSCGHEG----------- 176

  Fly   240 KHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRN---GSTRAEVIHDAIQV 301
             |..:..:...|.....|..|.:|:|..:.||:|..|:.|.:||.|:|   |||:..|    :::
 Frog   177 -HSGSTTSYFKEFTAPPGHHRVRRNVWRSQKYMELFIVADYSMFMKQNRNLGSTKQRV----LEI 236

  Fly   302 ANIADLYFRTLNTRVSVVYIETWGKNQAVIDGSKDISKAISNFNDYTSRNLFQIERDTTQLLTGE 366
            ||..|.::.::|.:|:::.:|.|.:... .|.:.|.:.::.:|..:..:...:.:.|..||:||.
 Frog   237 ANYVDKFYMSMNIKVALIGLEVWTERDQ-CDVNDDANDSLRSFLQWKQKLRSRKKHDNAQLITGV 300

  Fly   367 TFAGGEAGMAVPETVCT-PRAVGISVDVNVYEPHLL--AGTMAHMIGHNIGMGHD-DGREECFCR 427
            ||.|...|||..|.:|| ..:.|:|:|   :..:.:  |.||||.||||.||.|| ||   |...
 Frog   301 TFKGTTIGMAPLEGMCTAENSGGVSMD---HSENAIGAAATMAHEIGHNFGMSHDNDG---CCVE 359

  Fly   428 ---DWHGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLNKP--NEIELRRNCGNKVV 487
               :..|||||.|   ..:..|.|||.||::..:...|.|.|:||.|.|  |::.:.:.|||..:
 Frog   360 ATPEQGGCIMAAS---TGHPFPRKFSRCSQQQLMSYFRKGGGMCLFNMPNTNDLVMGKKCGNGFL 421

  Fly   488 EEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCD 552
            ||.|:||||..|||. :.||:...|.||:.|:||.|.||..|||:.....||:....|||||:|.
 Frog   422 EEGEQCDCGEPEECT-NPCCNANNCTLKAGAKCAHGECCQDCRLKSAGTQCREMAGSCDLPEFCT 485

  Fly   553 GEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGS 617
            |:...|||:|:..:||.|...:    .||:.|.|.|...||..:||.|...|...|::..|..|.
 Frog   486 GDAPFCPSNVYMLDGSSCAFGE----AYCYNGMCLTHQQQCIHLWGSGAVVAPDFCFQDVNKAGD 546

  Fly   618 INGHCGRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQV 682
            ..|:||::....::||...:.:||.:||:....:|.:..:.:: ..||| |.|.:.:|:......
 Frog   547 QYGNCGKNGRGQFVKCTSRDAKCGKIQCQTSSEKPRDPSMVKV-DNTII-INGYKMKCQGVHAYS 609

  Fly   683 GSNSYPEHGLVKDGTPCGDNLICLNQTCVSL-FPHVDQTKCPANSQGLECSEHGVCTNTNRCFCD 746
            ......:.|||..||.|||.::|.::.|.:. |..:||  |.:     :|:.||||.:...|.|.
 Frog   610 MQEEEGDPGLVMTGTKCGDGMVCKDRRCQNASFFELDQ--CVS-----KCNGHGVCNSNRNCHCH 667

  Fly   747 MGW----------GGNDCSSVVLLTTALPTEALPTPENTIKMEKKETPYGTSDQNRISTLTMVII 801
            .||          ||:..|.             |.|        .:.|.|.       |:.:||:
 Frog   668 SGWAPPYCDKPGPGGSQDSG-------------PAP--------NDIPVGV-------TIFLVIL 704

  Fly   802 LTVIVKCVFISFATLAVCYRRKTTTLKYDPPYSKKPIAKSYGGAATAPNHH--------SVEEVS 858
            ..|::    :..|...|.:.||..:|.  ..:.||..||.....||.|..:        ::.::|
 Frog   705 FLVLL----LGLAIAMVYWYRKPGSLL--NKWLKKSKAKCSLCKATQPKANRAYSSKIFTMRDIS 763

  Fly   859 LDGSSKLVYANQTGFRD 875
            ....|.   :.||..||
 Frog   764 YPVKSD---SKQTHSRD 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 33/100 (33%)
Reprolysin 270..473 CDD:279729 74/212 (35%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 73/210 (35%)
Disintegrin 488..562 CDD:278623 36/73 (49%)
ACR 566..713 CDD:214743 43/146 (29%)
adam33XP_012819411.2 Pep_M12B_propep 36..158 CDD:396235 32/99 (32%)
Reprolysin 206..405 CDD:396140 74/212 (35%)
DISIN 422..496 CDD:214490 36/74 (49%)
ACR 498..639 CDD:214743 43/146 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 83 1.000 Domainoid score I8218
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm48880
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X50
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.010

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