DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam22

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_038964489.1 Gene:Adam22 / 57033 RGDID:1585016 Length:977 Species:Rattus norvegicus


Alignment Length:1050 Identity:298/1050 - (28%)
Similarity:453/1050 - (43%) Gaps:234/1050 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LCVFVT-------SAGEADYTLDDSFWNEESPVGEVERLLKEYRQNQ---ELVRRIGGHYYQIIY 69
            |||..|       .||:|..        .|...|:..|.|:  ||:.   .|:.|:||.      
  Rat    12 LCVLGTYPLARCGRAGDASL--------RELERGDGNRFLE--RQSTVPLRLIYRLGGE------ 60

  Fly    70 PVQLRHHEKMGISTREVSLPKPGQRPRPHDDSGFNRGRTKKHFHRTSLLIKAFNHKFRLDLELNS 134
              ....||::....|              .|.|   ||...|..:.|..:.||...|.||:.||.
  Rat    61 --DETQHEQLNTRVR--------------GDPG---GRQPTHVDKASFRVDAFGTSFILDVLLNH 106

  Fly   135 QLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNGVSGVIHIGNETFVIH 199
            :|||....::|...||.:|:....  |||||.|.::..|.:..|..||:|:.|:.:.||.|::|.
  Rat   107 ELLSSGYVERHIEHGGKVVENKGG--EHCYYQGQIRGNPASFVALSTCHGLHGMFYDGNHTYLIE 169

  Fly   200 PFYGGDLSKHP--HVIFEARTKANKGCANSGNLDSW------------------RLSRRTKHLSA 244
            | ...::|:..  |.::::|..       ...||..                  ||.||.:.|. 
  Rat   170 P-EENEMSQESQFHSVYKSRLL-------EFPLDDLPSEFQRINITAPQFTLKPRLKRRKRQLL- 225

  Fly   245 GVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRNGSTRAEVIHD---AIQVANIAD 306
                           |..|:|.|.|||||..|:.|..||.|.    |..|::.   |..|.|:||
  Rat   226 ---------------RFPRNVEEETKYIELMIVNDHLMFKKH----RLSVVYTNTYAKSVVNMAD 271

  Fly   307 LYFR-TLNTRVSVVYIETW-GKNQAVIDGSKDISKAISNFNDYTSRNLFQIERDTTQLLTGETFA 369
            :.:: .|.||:.:|.:||| ..|:..|  |::....:..|..| .|:..:.:.|...|.:|..|.
  Rat   272 VIYKDQLKTRIVLVAMETWAADNKFAI--SENPLVTLREFMKY-RRDFIKEKADAVHLFSGSQFE 333

  Fly   370 GGEAGMAVPETVCTPRAVGISVDVNVY-EPHLLAGTMAHMIGHNIGMGHDDGR---EECFCRD-W 429
            ...:|.|....:|:....|   .||.: :..|:|.|:|..:.||||:..|..:   .||.|.| |
  Rat   334 SSRSGAAYIGGICSLLRGG---GVNEFGKTDLMAVTLAQSLAHNIGIISDKRKLASGECKCEDTW 395

  Fly   430 HGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLNKPNEIELRRNCGNKVVEEDEECD 494
            .||||..:    ....|.||::|:.::|.|.|.:|.|.||.|||:::.....|||..:|..||||
  Rat   396 SGCIMGDT----GYYLPKKFTQCNIEEYHDFLNSGGGACLFNKPSKLLDPPECGNGFIETGEECD 456

  Fly   495 CGTFEECALD--QCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDGEIGQ 557
            |||..||||:  :||.  .|.|..::||:.|.||.:|:.:|...:||::.|:||:.|.|.|...|
  Rat   457 CGTPAECALEGAECCK--KCTLTQDSQCSDGLCCKKCKFQPLGTVCREAVNDCDIREICSGNSSQ 519

  Fly   558 CPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHC 622
            |..:|.|.:|..|    .|..|.||.|.|.|...||:.|||...:|:||.|||:.|.:|:..|:|
  Rat   520 CAPNVHKMDGYSC----DGTQGICFGGRCKTRDRQCKYIWGQKVTASDRYCYEKLNIEGTEKGNC 580

  Fly   623 GRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSY 687
            |:| .:.:.:|...:|.||.|.|.:....|....:|...:.|::..:|:...|  :.|.|.....
  Rat   581 GKD-KDTWTQCNKRDVLCGFLLCTNIGNIPRLGELDGEITSTLVVQQGRTLNC--SGGHVKLEED 642

  Fly   688 PEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLECSEHGVCTNTNRCFCDMGWGGN 752
            .:.|.|:||||||..::||...|:.: ...:.:.|.:|..|..||.:|||:|..:|.|:..|.|.
  Rat   643 VDLGYVEDGTPCGPQMMCLEHRCLPM-ASFNFSTCLSNKAGTVCSGNGVCSNELKCVCNRHWTGA 706

  Fly   753 DCSSVVLLTTALPTEALPTPENTIKMEKKETPYGTSDQNRISTLTMVIILTVIVKCVFISFATLA 817
            ||.:             ..|.|    :..:|....|......|   .||:.:|...:.:....|.
  Rat   707 DCGT-------------HFPHN----DDAKTGITLSGNGVAGT---NIIIGIIAGTILVLALILG 751

  Fly   818 VC------YRRKTTTLKYDPPYSKKP-IAKSY------GGAATAPN------------------- 850
            :.      ||.:....:.|  |.||| ...|:      ||:|.:.:                   
  Rat   752 ITAWGYKNYREQRQLPQGD--YVKKPGDGDSFYSDFPPGGSADSASSSKKRSAFLSHFQISTCSI 814

  Fly   851 -HHSV-EEVSL--DGSSKLVYA--------------------------NQTGFRDKGIHGRRY-- 883
             |:|: :.:||  ..|:.|.::                          ...|...|.|.|:|:  
  Rat   815 THYSISQNISLFCSRSNGLSHSWSERIPDTKHISDICENGRPRSNSWQGNVGGNKKKIRGKRFRP 879

  Fly   884 -TTCGEDDQSHAEKG-ILKKHGYGLVHGEQLKDKWGDDN-QSDNLELITQDG------TLA---- 935
             :...|.:....|.| .|.:...|:..|       |.|: |:.:|:..||||      ||:    
  Rat   880 RSNSTEREPQAPEPGHSLAQTSPGISPG-------GSDSPQTGSLDHSTQDGQHQENRTLSPAKS 937

  Fly   936 -STSGGAAAS 944
             |:|.|:.||
  Rat   938 PSSSTGSIAS 947

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 37/111 (33%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 68/210 (32%)
Disintegrin 488..561 CDD:459709 33/74 (45%)
ACR 566..713 CDD:214743 50/146 (34%)
Adam22XP_038964489.1 Pep_M12B_propep 70..185 CDD:460254 40/134 (30%)
Reprolysin 236..435 CDD:426256 69/212 (33%)
Disintegrin 450..523 CDD:459709 33/74 (45%)
ACR 527..668 CDD:214743 50/147 (34%)

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