DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam15

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_008759425.1 Gene:Adam15 / 57025 RGDID:620402 Length:875 Species:Rattus norvegicus


Alignment Length:693 Identity:212/693 - (30%)
Similarity:331/693 - (47%) Gaps:77/693 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 TSLLIKAFNHKFRLDLELNSQLLSPNIQQKHYHVGG------YLVDGNR-----HDIEHCYYHGT 168
            |.:|........|:.|||:.:.....:||....|.|      |..||.|     |.:|:|.|.|.
  Rat    59 TEVLQTGLPETLRIGLELDGENHILELQQNRDLVPGRPTLVWYQPDGTRMVSEGHSLENCCYRGR 123

  Fly   169 VKDYPGASAAFHTCNGVSGVIHIGNE---TFVIHPFYGGDLSKHPHVIFEARTKANKG--CANSG 228
            |:..|.:..:...|:|:.|::.:..|   |..:.|   |||.: |.::...:.....|  ||   
  Rat   124 VQGRPSSWVSLCACSGIRGLVVLSPERSYTLELGP---GDLQR-PLIVSRIQDLLLPGHTCA--- 181

  Fly   229 NLDSWR----------LSRRTKHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMF 283
              .||.          |.....||..     |....|:...|.||||...||.:|..|:.|.:  
  Rat   182 --PSWHAFVPTEAAPDLLLEQHHLRR-----VRRQTQSPDPRLKRDVVTETKIVELVIVADNS-- 237

  Fly   284 DKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVYIETWGKNQAVIDGSKDISKAISNFNDYT 348
            :.|......::::..::||.:.|.:|:.||.||::|.:|.|.:.. :|:.|.:.:..:.||..:.
  Rat   238 EVRKYPDFQQLLNRTLEVALLLDTFFQPLNVRVALVGLEAWTQRD-LIEMSSNPAVLLDNFLRWR 301

  Fly   349 SRNLF-QIERDTTQLLTGETFAGGEAGMAVPETVCTPR-AVGISVDVNVYEPHLL--AGTMAHMI 409
            ..:|. ::..|:.||:|..:|:|...|||:..::|:|. :.|:::|   :...:|  |.::||.:
  Rat   302 RTDLLPRLPHDSAQLVTVTSFSGPMVGMAIQNSICSPDFSGGVNMD---HSTSILGVASSIAHEL 363

  Fly   410 GHNIGMGHDDGREECFC---RDWHGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLN 471
            ||::|:.||.....|.|   .....|||..|   .:.:....||.||:.....||..|.|.||..
  Rat   364 GHSLGLDHDSPGNSCPCPGPAPAKSCIMEAS---TDFLPGLNFSNCSRWALEKALLDGMGSCLFE 425

  Fly   472 -KPNEIELRRNCGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCAS-GACCDQCRLRPK 534
             .|:...:...|||..|:..|:||||..:||. |.|||..||:|:..||||| |.||..|:|:|.
  Rat   426 WPPSRAPMSSLCGNMFVDPGEQCDCGFPDECT-DPCCDYFTCQLRPGAQCASDGPCCQNCKLQPA 489

  Fly   535 DYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGY 599
            .:.||...::|||||:|.|:..|||.|:...:|.||...:    ..|..|.|.:.:.||:::||.
  Rat   490 GWQCRLPTDDCDLPEFCLGDSSQCPPDIRLGDGEPCASGE----AVCMHGRCASYTRQCQSLWGP 550

  Fly   600 GGSAADRQCYEQFNSKGSINGHCGRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGI-DQLYSR 663
            |...|...|.:..|::|:..|.|||..:..|:.|...:..||.|||:.|..||:...: |||  .
  Rat   551 GAQPAAPLCLQTANTRGNAFGSCGRSPSGSYMPCNLRDAICGQLQCQWGRNQPLLGSVQDQL--S 613

  Fly   664 TIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTPCGDNLICLNQTC--VSLFPHVDQTKCPANS 726
            .::...|.:..|......:| |...:..|...||.||..|:|:...|  |.|   :...:|.:  
  Rat   614 EVLEANGTQLNCSWVDLDLG-NDVAQPLLALPGTACGPGLVCIGHRCQPVDL---LGAQECRS-- 672

  Fly   727 QGLECSEHGVCTNTNRCFCDMGWGGNDCSSVVLLTTALPTEAL 769
               :|..||||.::..|.||.||...||.:.:..|::|.|..|
  Rat   673 ---KCHGHGVCDSSRHCHCDEGWAPPDCMTQLRATSSLTTGLL 712

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 31/112 (28%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 59/207 (29%)
Disintegrin 488..561 CDD:459709 37/73 (51%)
ACR 566..713 CDD:214743 45/149 (30%)
Adam15XP_008759425.1 Pep_M12B_propep 67..147 CDD:460254 22/79 (28%)
ZnMc_adamalysin_II_like 226..424 CDD:239797 58/206 (28%)
DISIN 443..516 CDD:214490 37/73 (51%)
ACR 521..662 CDD:214743 44/147 (30%)

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