DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Gm5347

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_001073400.1 Gene:Gm5347 / 384814 MGIID:3647274 Length:713 Species:Mus musculus


Alignment Length:640 Identity:187/640 - (29%)
Similarity:293/640 - (45%) Gaps:63/640 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 LDLELNSQLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNG-VSGVIHI 191
            :.::....|:|.|.....|...|.|::........|||||.|.:.|.:....:||.| :.|.:.|
Mouse    73 ITMKPKKNLISRNFLLFTYSDQGDLLEEQPFVQNDCYYHGYVDEDPESLVIVNTCFGSLQGTLEI 137

  Fly   192 GNETFVIHPFYGGDLSKHPHVIFEARTKANKGCANSGNLDSWRLSRRTKHLSAGVAGVVEEILQA 256
            ...|:.|.|  ....|...|:.::..:..::.......|....::|:.| |....|..:.:|...
Mouse   138 NGTTYEIMP--KSSTSTFEHLAYKMESGESEPSPMRCGLSEEEIARQMK-LQESNASTLLQIPYE 199

  Fly   257 GVGRNKRDVREATKYIETAIIVDKAMFDKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVYI 321
            ....:.|       :|:..:::|...:..||.:| ...|.|.:||.|..:.|:..:.|.|.:..:
Mouse   200 NWWTHHR-------FIDYFVVIDHKRYVHRNNNT-TTCIQDMLQVVNGINGYYLQIQTDVVLTKL 256

  Fly   322 ETWGKNQAVIDGSKDISKAISNFNDYTSRNL-FQIERDTTQLLTGETFAGGEAGMAVPETVCTPR 385
            |.|.:|. :|:..:::||.:..|.::..:.: .::..|...|....:: |...|:|...|||   
Mouse   257 EVWSQNN-LINVEQEMSKVLGAFCNWKIKTIGKRVRHDIIHLFVRRSY-GIYLGLAYVGTVC--- 316

  Fly   386 AVGISVDVNVYEPHLL---AGTMAHMIGHNIGMGHDDGREECFCRDWHGCIMAQSIVGQENVQPY 447
             :.::..||.:....|   |..:||.:|||.||.||.  ..|.| ..|.||||.    .::..| 
Mouse   317 -LTLNCAVNSFLSDSLSDMAFIIAHEMGHNFGMMHDG--SACTC-GLHSCIMAP----HKSNSP- 372

  Fly   448 KFSECSKKDYIDALRTGHGLCLLNKPNEIE----LRRNCGNKVVEEDEECDCGTFEECALDQCCD 508
            |||.||.::....:....  ||.:.|:.::    :...|||.:|||.|:||||..|.|..|.||.
Mouse   373 KFSNCSYEEMFSVVTKRS--CLYDIPDALKTINLMPTKCGNNLVEEGEQCDCGNSESCLQDPCCS 435

  Fly   509 GITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLS 573
            . .|..|..|:||.|.||..|:......:||...|||||||:|:|..|:||.||:|.:|..|.. 
Mouse   436 S-NCVFKPGAKCAFGRCCKNCQFLKAGTVCRQEKNECDLPEWCNGTSGECPGDVYKADGIRCSR- 498

  Fly   574 KTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANEHYIKCEPENV 638
                .|||::..|...:.||..|:|....:||..||.:.|.:|...|:||.|::::.| ||..:|
Mouse   499 ----GGYCYKMECQRHNRQCREIFGKRSRSADEICYMEMNRRGDRFGNCGNDSSKYKI-CELTDV 558

  Fly   639 QCGTLQCKDGERQPVNDGIDQLYSR----TIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTPC 699
            .||.:||         :.:.||..|    |:.........|.......|. :..:.|.|.|||||
Mouse   559 LCGRIQC---------ENVIQLPQRRNHETVHFTHFSNNTCWTMDYHFGI-TIDDVGAVSDGTPC 613

  Fly   700 GDNLICLNQTCVSLFPHVDQTKCPANSQGLECSEHGVCTNTNRCFCDMGWGGNDC 754
            ..:.|||::.|||      ::...:|.....|...|||.|.:.|.|:..|...||
Mouse   614 APDHICLDRKCVS------KSVLVSNCTPQLCHMQGVCNNKDHCHCNNTWEPPDC 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 23/85 (27%)
Reprolysin 270..473 CDD:279729 56/206 (27%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 56/204 (27%)
Disintegrin 488..562 CDD:278623 35/73 (48%)
ACR 566..713 CDD:214743 46/150 (31%)
Gm5347NP_001073400.1 Pep_M12B_propep 40..158 CDD:366707 23/86 (27%)
ZnMc_adamalysin_II_like 206..394 CDD:239797 57/211 (27%)
Disintegrin 415..487 CDD:365943 35/72 (49%)
ACR 491..627 CDD:214743 47/157 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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