DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam26b

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_001009547.1 Gene:Adam26b / 382007 MGIID:3588304 Length:699 Species:Mus musculus


Alignment Length:660 Identity:203/660 - (30%)
Similarity:296/660 - (44%) Gaps:106/660 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 LDLELNSQLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNG-VSGVIHI 191
            :.::....|:|.|:....|...|.|::........|||||.|.:.|.:....:||.| :.|.:.|
Mouse    62 ITMKPKKNLMSRNLILLTYTQQGDLLEQRPFVPNDCYYHGYVDEDPESLVILNTCFGSLQGTLEI 126

  Fly   192 GNETFVIHPFYGGDLSKHPHVIFEARTKANKGCANSGNLDSWRLSRRTKHLSAGVAGVVEEILQA 256
            ...|:.|.|  ....|...|:.:    |.:.|       ||     ....:..|::  .|||.| 
Mouse   127 NGTTYEIMP--KSSTSTFEHLAY----KMDNG-------DS-----EPSPMRCGLS--EEEIAQ- 170

  Fly   257 GVGRNKRDVREAT----------------KYIETAIIVDKAMFDKRNGSTRAEVIHDAIQVANIA 305
                 :|.:||..                ::||..:::|...:..||.:. ...|.|.:|:.|..
Mouse   171 -----QRKLRERNAPTLLQIPHENWWTHHRFIEYFVVIDHKQYVHRNNNI-TTCIQDMLQIVNGV 229

  Fly   306 DLYFRTLNTRVSVVYIETWG-KNQAVIDGSKDISKAISNFNDYTSRNLF--QIERDTTQLLTGET 367
            :.|:..::|.|.:..:|.|. ||...::.|  |.|.:.:|..: .:|:|  :|..|...||..:.
Mouse   230 NGYYLQIDTDVVLTALEIWNEKNYINVELS--IFKVLGDFCTW-KQNMFGNRIRHDIIHLLVRQG 291

  Fly   368 FAGGEAGMAVPETVCTPRAVGIS---VDVNVYEPHLLAGTMAHMIGHNIGMGHDDGREECFCRDW 429
            : |...|:|....||||...|:|   .||.....|:    :||.:|||:||.||.....|..:| 
Mouse   292 Y-GLYLGLAYLADVCTPYNCGVSSFLSDVMSDMAHI----VAHEMGHNLGMKHDGIGCTCGLKD- 350

  Fly   430 HGCIMAQSIVGQENVQPY-----KFSECSKKDYIDALRTGHGLCLLNKPNEIELRRN-CGNKVVE 488
              |:||          ||     |||.||.::....:....  ||.:.|..:..... |||||||
Mouse   351 --CLMA----------PYKTNSPKFSNCSYEEMYSVVTKRS--CLYDIPEALVTNLTVCGNKVVE 401

  Fly   489 EDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDG 553
            |.||||||:.|.|..|.||.. .|.||..||||.|.||..|:......:||:..|||||||:|:|
Mouse   402 EGEECDCGSTESCLQDPCCSS-DCVLKPGAQCAFGLCCQDCQFLKTGTVCREEKNECDLPEWCNG 465

  Fly   554 EIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSI 618
            ...:||.||:|.:|.||    :| .|||::..|.....||..|:|.|..:||..||.:.|.:|..
Mouse   466 TSAECPGDVYKADGIPC----SG-EGYCYKMECHQRDEQCRKIFGNGSRSADEICYMEMNRRGDR 525

  Fly   619 NGHCGRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSR----TIISIKGQEFECKATS 679
            .|:||.|::::.| ||..:|.||.:||         :.:.||..|    |:.........|....
Mouse   526 FGNCGNDSSKYKI-CELADVLCGRIQC---------ENVIQLPQRRNHETVHYTHFSNVTCWTMD 580

  Fly   680 GQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLECSEHGVCTNTNRCF 744
            ...|. :..:.|.|.|||.|....||:::.|||      ::...:|.....|...|||.|.|.|.
Mouse   581 YHFGI-TIDDIGAVSDGTACAPYHICVDRKCVS------KSDLVSNCTTKLCHMQGVCNNKNHCH 638

  Fly   745 CDMGWGGNDC 754
            |...|...||
Mouse   639 CTNTWEPPDC 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 23/85 (27%)
Reprolysin 270..473 CDD:279729 61/213 (29%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 61/211 (29%)
Disintegrin 488..562 CDD:278623 37/73 (51%)
ACR 566..713 CDD:214743 47/150 (31%)
Adam26bNP_001009547.1 Pep_M12B_propep 39..144 CDD:279848 22/83 (27%)
Reprolysin 195..385 CDD:279729 61/213 (29%)
ZnMc_adamalysin_II_like 195..383 CDD:239797 61/211 (29%)
Disintegrin 401..474 CDD:278623 37/73 (51%)
ACR 477..613 CDD:214743 48/157 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836152
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3607
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11905
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X50
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

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