DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and adam8a

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_956931.1 Gene:adam8a / 368917 ZFINID:ZDB-GENE-030616-622 Length:843 Species:Danio rerio


Alignment Length:741 Identity:213/741 - (28%)
Similarity:330/741 - (44%) Gaps:150/741 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 RGRTKKHFHRTSLLIKAFNHKFRLD-----------LELNSQLLSPNIQQKHYHVGGYLVDGNRH 158
            ||||:    |::..::.:..:...|           |..|.:||.......||...|.....:.:
Zfish    38 RGRTR----RSASSLQKYPEQLEYDVAIDGRNLTISLHRNRELLGKQYTLTHYGEDGISETKSSN 98

  Fly   159 DIEHCYYHGTVKDYPGASAAFHTCNGVSGVIHIGNETFVIHPF---YGGDLSKHPHVIFEARTKA 220
            ...||||||.:.::..:|.:...|:|:.|.:.:.::.::|.|.   ..||     |.|::..   
Zfish    99 KFNHCYYHGHIHNFEDSSVSVGLCSGMEGFLRVNDQVYLIEPLEESLDGD-----HAIYKQE--- 155

  Fly   221 NKGCANSGNLDSWRLSRRTKHLSAGVAGVVEEIL------QAGV--GRNKRD--VREATKYIETA 275
                           ..|||.   |..|.:.:.:      .:|:  |:|.|:  .|...:.:|..
Zfish   156 ---------------HLRTKR---GAYGYINDTVYDLGPKSSGLYKGKNMRNKAPRGGQQIVEMV 202

  Fly   276 IIVDKAMFDKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVYIETWGKNQAVIDGSKDISKA 340
            ::||...: |:.||.: ::....:.|||..|..:|.||.||.:|.:|.|.:.. :||.|...:..
Zfish   203 LVVDNTEY-KKFGSFK-KIEERMMLVANHVDKLYRPLNIRVMLVGLEVWSQRD-LIDVSSRPNLT 264

  Fly   341 ISNFNDYTSRNLFQIER-DTTQLLTGETFAGGEAGMAVPETVCTPRAVGISVDVNVYEPHLLAGT 404
            :..|..:...:|.|.:: |....:||..|.|...|:|....:|:..:.|...:.:...|..:|.|
Zfish   265 LERFLKWRRDSLLQRKKHDNAHFITGIDFEGSTVGLATLYAMCSSSSSGAVNEDHNSNPIAVAST 329

  Fly   405 MAHMIGHNIGMGHDDGREECFCRDWHGCIMAQSIVGQENVQPYKFSECSK---KDYIDALRTGHG 466
            :||.:|||:||.|||  ..|.|....||||..:|   .::.|..||.||:   |.:::...|.  
Zfish   330 VAHEMGHNLGMSHDD--SSCGCSSNKGCIMGDTI---GSIYPDSFSTCSQSSLKAFLENYDTN-- 387

  Fly   467 LCLLNKPNEIELRRN--CGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCDQC 529
             ||::.|||.::...  |||..||:.|||||||.|||. :.||:..||:|...|:||.|.||..|
Zfish   388 -CLIDVPNEGQIYGGPVCGNAFVEKGEECDCGTVEECN-NPCCNATTCRLTEGARCAHGECCHNC 450

  Fly   530 RLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCE 594
            :|:....:||.|.::|||.|||.||...||.|.:|.||.||..::    |||:.|.|||....|:
Zfish   451 QLKHTGSLCRKSAHDCDLDEYCTGESAFCPEDDYKMNGLPCNYNQ----GYCYNGQCPTHKEHCK 511

  Fly   595 AIWGYGGSAADRQCYEQFN-----SKGSINGHCGRDANEHYIKCEPENVQCGTLQCKDGERQP-- 652
            .:||.|....|..|: |:|     ||.:                  |:.:||.:.|..|...|  
Zfish   512 MLWGSGADVDDDACF-QYNVIDRTSKSA------------------EHRKCGRIYCYGGNPFPKT 557

  Fly   653 -----VNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVS 712
                 ||     :.|||          |...   :.|:...:.|:|..||.||.|.:|....|:.
Zfish   558 NKKANVN-----VQSRT----------CYMA---LDSSPTEDLGMVPTGTKCGTNKVCYKSLCLD 604

  Fly   713 LFPHVDQTKCPANSQGLECSEHGVCTNTNRCFCDMGWGGNDC------------SSVVLLTTALP 765
            :..:  .|:..:|    :|:..|||.:..:|.||.||....|            |.|:.:||:|.
Zfish   605 ISMY--GTENCSN----KCNNRGVCNHELKCHCDPGWAPPYCDIQLSELHKMRKSVVIGVTTSLA 663

  Fly   766 -------TEALPTPENTIKMEKKETP 784
                   ..||....|.|...:|:.|
Zfish   664 ILVLIIIIGALVYNRNKITEFRKKRP 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 28/122 (23%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 62/204 (30%)
Disintegrin 488..561 CDD:459709 37/72 (51%)
ACR 566..713 CDD:214743 43/158 (27%)
adam8aNP_956931.1 Pep_M12B_propep 32..157 CDD:460254 29/145 (20%)
ZnMc_adamalysin_II_like 199..389 CDD:239797 60/200 (30%)
DISIN 410..484 CDD:214490 38/74 (51%)
ACR 486..605 CDD:214743 43/159 (27%)
EGF_2 617..640 CDD:400365 9/22 (41%)
PHA03378 <685..783 CDD:223065 2/5 (40%)

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