DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam33

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_038960925.1 Gene:Adam33 / 311425 RGDID:1305278 Length:799 Species:Rattus norvegicus


Alignment Length:723 Identity:230/723 - (31%)
Similarity:355/723 - (49%) Gaps:107/723 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 GGHYYQIIYPVQLRHHEKMGISTREVSLPKPGQRPRPHDDSGFNRGRTKKHFHRTSLLIKAFNHK 125
            ||   :::.|    |....|.:..:|:|.:...:|    |||.             :.:||....
  Rat    39 GG---ELVTP----HWVLDGKTWLKVTLKEQISKP----DSGL-------------VALKAEGQD 79

  Fly   126 FRLDLELNSQLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNGVSGVIH 190
            ..|:||.|.:||:|...:.:|...|..:..:.:..:||:|.|.|:.:..:.....||:|:||:|.
  Rat    80 LLLELEKNHRLLAPGYTETYYSRDGQPIVLSPNHTDHCHYQGCVRGFRESWVVLSTCSGMSGLIV 144

  Fly   191 IGNE-TFVIHPFYGGDLSKHP-HVIFEARTKANKGCANSGNLDSWRLSRRTKH--LSAGVAGVVE 251
            :.:: ::.:||:..||....| |.||...           .|.:||.:|:.|:  ..||:|    
  Rat   145 LSSKVSYYLHPWMPGDTKDFPTHKIFRVE-----------QLFTWRGARKDKNSQFKAGMA---- 194

  Fly   252 EILQAGVGRNKRDVREATKYIETAIIVDKAMF--DKRN-GSTRAEVIHDAIQVANIADLYFRTLN 313
            .:......|.:|:.|.:.||:|..|:.|.|:|  .::| ..||..:    :::||..|...|||:
  Rat   195 RLPHVPHRRMRREARRSPKYLELYIVADHALFLLQRQNLNHTRQRL----LEIANCVDQILRTLD 255

  Fly   314 TRVSVVYIETWGKNQAVIDGSK---DISKAISNFNDYTSRNLFQIERDTTQLLTGETFAGGEAGM 375
            .::.:..:|.|.:.    |.|:   |.::.:..|..:......:...|:||||||.||.|...|:
  Rat   256 IQLVLTGLEVWTEQ----DHSRITQDANETLWAFLQWRRGLWVRRPHDSTQLLTGRTFQGTTVGL 316

  Fly   376 AVPETVC-TPRAVGISVDVNVYEPHLLAGTMAHMIGHNIGMGHDDGREECFC----RDWHGCIMA 435
            |..|.:| ...:.|:|.|.:.. |...|.||||.|||::|:.||.  |.| |    .:..||:| 
  Rat   317 APVEGMCHAESSGGVSTDHSEL-PIGTAATMAHEIGHSLGLHHDP--EGC-CMEADAEQGGCVM- 376

  Fly   436 QSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLN--KPNEIELRRNCGNKVVEEDEECDCGTF 498
            ::..|  :..|..||.||::......|.|.|.||.|  .|..:.|...|||..||.:||||||:.
  Rat   377 EAATG--HPFPRVFSACSRRQLRTFFRKGGGACLSNVSAPGLLVLPSRCGNGFVEAEEECDCGSG 439

  Fly   499 EECALDQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVF 563
            :: ..|.||....|.|::.||||.|.||.:|.|:|....||.:.|:|||||:|.|....||:||:
  Rat   440 QK-RPDPCCFAHNCSLRAGAQCAQGDCCARCLLKPAGTPCRPAANDCDLPEFCTGTSPHCPADVY 503

  Fly   564 KKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANE 628
            ..:||||...:    |||..|:||||..||:.:||.|...|...|::|.||.|:..|:||:|:..
  Rat   504 LLDGSPCAEGR----GYCLDGWCPTLEKQCQQLWGPGSQPAPEPCFQQMNSVGNSQGNCGQDSKG 564

  Fly   629 HYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPE-H-- 690
            .::.|...:.|||.|.|:.|:..|:...:..:.| ||: :||::..|:      |:...|: |  
  Rat   565 SFLPCTQRDAQCGKLLCQGGKPNPLVPHVVTVDS-TIL-LKGRQVLCR------GAFVLPDTHLD 621

  Fly   691 ----GLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLE-----CSEHGVCTNTNRCFCD 746
                |||:.||.||..::|..:.|.:           |.||.||     |...|||.:...|.|.
  Rat   622 QLGLGLVEPGTRCGPRMVCQERHCQN-----------ATSQELERCSSGCHNRGVCNSNRNCHCA 675

  Fly   747 MGWGGNDC 754
            .||....|
  Rat   676 AGWAPPFC 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 28/108 (26%)
Reprolysin 270..473 CDD:279729 69/215 (32%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 68/211 (32%)
Disintegrin 488..562 CDD:278623 34/73 (47%)
ACR 566..713 CDD:214743 53/153 (35%)
Adam33XP_038960925.1 Pep_M12B_propep 41..170 CDD:396235 37/149 (25%)
ZnMc_adamalysin_II_like 213..410 CDD:239797 68/211 (32%)
DISIN 429..503 CDD:214490 35/74 (47%)
ACR 505..647 CDD:214743 53/153 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339804
Domainoid 1 1.000 90 1.000 Domainoid score I7582
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11905
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X50
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

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