DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mmd and Adam7

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_064697.2 Gene:Adam7 / 29641 RGDID:62032 Length:789 Species:Rattus norvegicus


Alignment Length:769 Identity:199/769 - (25%)
Similarity:349/769 - (45%) Gaps:108/769 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 QLRHHEKMGISTREVSLPKPGQRPRPHDDSGFNRGRTKKHFHRTSLL-IKAFNHKFRLDLELNSQ 135
            |::....:|:..:|:..||.....:..|....:...|.:.:....|. ||.......|.|....:
  Rat    15 QMQGRGIVGVEGQELVHPKKLSLLQKRDLERIHDSDTPEEYEEELLYEIKLGRKTLTLHLLKARE 79

  Fly   136 LLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNGVSGVIHIGNETFVIHP 200
            .|:.|..:.:|::...:|..:...::||:|.|::.....::|:..||||:.|...:.::.::|.|
  Rat    80 FLALNYSETYYNIKREMVTRHPQILDHCFYQGSIIHEFDSAASISTCNGLRGFFRVNDQRYLIEP 144

  Fly   201 FYGGDLSKHPHVIFEARTKA----NKGCANSGNLDSWRLSRRTKHLSAGVAGVVEEILQAGVGRN 261
            ....|  :..|::|:...||    |..|      :....::::..:.|           ..:..:
  Rat   145 VKYSD--EGDHLVFKYNVKAPYATNYSC------EGLNFTKKSTLIDA-----------KNIEEH 190

  Fly   262 KRDVREATKYIETAIIVDKAMFDKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVYIETWGK 326
            |.:.....|:||..::.|:.:: :||...:.::......:.|..::.::.||.||::..:|.|..
  Rat   191 KVEDYHKEKFIELFVVADEFVY-RRNSKPQNKLRKRIWGMVNFVNMIYKALNIRVTLTGMEIWSA 254

  Fly   327 NQAVIDGSKDISKAISNFNDYTSRNL-FQIERDTTQLLTGETFAGGEAGMAVPETVC-TPRAVGI 389
            ... |:...::...:.:|:.:....| .:.:.|...||:|:.......|:|.|..:| |.|:..:
  Rat   255 GDE-IEIVSNLESTLLHFSTWQETVLKKRKDFDHVILLSGKWLYTSMQGIAYPGGICQTLRSCSV 318

  Fly   390 SVDVNVYEPHLLAGTMAHMIGHNIGMGHDDGREECFCRDWHGCIMAQSIVGQENVQPYKFSECSK 454
            ..|: :.:.:::...|||.:||::||.|||  ..|.|.      :.:.::|..::...|||:||:
  Rat   319 VKDL-LPDVNIIGNRMAHQLGHSLGMRHDD--FPCTCP------LGKCVMGAGSIPAIKFSKCSQ 374

  Fly   455 KDYIDALRTGHGLCLLNK--PNEIELRRNCGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSE 517
            ..|...|:.....|:||.  |.|......||||.|:|.||||||..:||. :.|||...|.||..
  Rat   375 TQYQQFLKNQKPACILNNPLPEEFNDYPFCGNKKVDEGEECDCGPVQECT-NPCCDAHKCVLKPG 438

  Fly   518 AQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCF 582
            ..|..|.||:.|:::.:..|||.:.||||:.|.|.|...:||.|..:.||.||   |.| .||||
  Rat   439 FTCVEGECCESCQMKKEGVICRPAKNECDISEVCTGYSPECPKDESQANGFPC---KNG-EGYCF 499

  Fly   583 QGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANEHYIKCEPENVQCGTLQCKD 647
            .|.|||...||..::..|...:...|| :.|.||:..|:| ::.:..::.||.::::||.:.|..
  Rat   500 MGLCPTRDDQCAELFSGGAEESHSLCY-RMNQKGNRFGYC-KNKDNTFVPCEEKDLKCGKIYCTG 562

  Fly   648 GERQPVNDGIDQLYS----RTIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTPCGDNLICLNQ 708
            | |:..:.|.|:.|:    :..||||     ||.......|.   :.|||..||.||:.::|.|.
  Rat   563 G-RRSAHLGEDKTYNLKNVKQNISIK-----CKTMFLYHNSR---DMGLVNSGTKCGEGMVCSNG 618

  Fly   709 TCVSLFPHVDQTKCPANSQGLECSEHGVCTNTNRCFCDMG-----WGGNDCSSVVLLTTALPTEA 768
            .|:.:....:.|.|.:     .|.|:.|..|...|.|:.|     ||                ||
  Rat   619 ECIEMEKAYNSTICSS-----LCDENDVDDNEPDCQCEEGPIITEWG----------------EA 662

  Fly   769 LPTPENTIKMEKKETPYGTSDQNRISTLTMVIILTVIVKCVFISFATLAVCYRR 822
            |                     |..|...||::|.:::  :.:....|.:.|::
  Rat   663 L---------------------NLTSVSIMVVVLVMVI--IGVGLVILLIRYQK 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 24/107 (22%)
Reprolysin 270..473 CDD:279729 50/206 (24%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 48/202 (24%)
Disintegrin 488..562 CDD:278623 32/73 (44%)
ACR 566..713 CDD:214743 51/150 (34%)
Adam7NP_064697.2 Pep_M12B_propep 28..156 CDD:396235 28/129 (22%)
Reprolysin 199..393 CDD:396140 50/204 (25%)
DISIN 410..482 CDD:214490 32/72 (44%)
ACR 486..623 CDD:214743 51/151 (34%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..789
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166339786
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3607
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11905
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X50
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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