DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mmd and Adam9

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_063131318.1 Gene:Adam9 / 290834 RGDID:621473 Length:909 Species:Rattus norvegicus


Alignment Length:959 Identity:283/959 - (29%)
Similarity:403/959 - (42%) Gaps:182/959 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 YQIIYPVQLRHHEKMGISTREVSLPKPGQRPRPHDDSGFNRGRTKKHFHRTSLLIKAFNHKFRLD 129
            |:|:.|.:|....      ||...|...|                     .|.:|:|...:..:.
  Rat    43 YEIVTPWRLSRER------REALRPSSKQ---------------------ISYVIQAQGKQHIIH 80

  Fly   130 LELNSQLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNGVSGVIHIGNE 194
            ||.|:.||..:.....|...|.|:..:.:...||:|.|.|:..|.::.|...|.|:.|::|:.|.
  Rat    81 LERNTDLLPNDFVVYTYDEEGSLLSDHPNVQSHCHYRGYVEGVPNSTVAVSACFGLRGLLHLENA 145

  Fly   195 TFVIHPFYGGDLSKHPHVIFEA----RTKANKGCANSGNLDSWRLSRRTKHLSAGVAGVVEEILQ 255
            :|.|.|.:..  |...||.:..    :.....|.:|.............:|.|      |.::| 
  Rat   146 SFGIEPLHNS--SHFEHVFYPMDDVHQEPLRCGVSNRDTEQEATQGEEEEHPS------VTQLL- 201

  Fly   256 AGVGRNKRDVREATKYIETAIIVDKAMFDKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVY 320
                |.:|.|...|:|:|..|:|||..::.. |..:..|..:.|::||..|..:..||.|:.:|.
  Rat   202 ----RRRRAVLPQTRYVELFIVVDKERYNMM-GRNQTAVREEMIRLANYLDSMYIMLNIRIVLVG 261

  Fly   321 IETWGKNQA--VIDGSKDISKAISNFNDYTSRNLFQIER---DTTQLLTGETFAGGEAGMAVPET 380
            :|.|.....  :|.|:.|:   :.||..:  |..|.|.|   |:.||:..:.| ||.||||...|
  Rat   262 LEIWTDRNPINIIGGAGDV---LGNFVQW--REKFLITRRRHDSAQLVLKKGF-GGTAGMAFVGT 320

  Fly   381 VCTPRAVGISVDVNVY---EPHLLAGTMAHMIGHNIGMGHDDGREECFCRDWHGCIMAQSIVGQE 442
            ||:....|   .:||:   .....|..:||.:|||:||.||||| ||||.. ..|||.....|..
  Rat   321 VCSRSHAG---GINVFGQITVETFASIVAHELGHNLGMNHDDGR-ECFCAA-KSCIMNSGASGSR 380

  Fly   443 NVQPYKFSECSKKDYIDALRTGHGLCLLN--KPNEIELRRNCGNKVVEEDEECDCGTFEECALDQ 505
            |     ||.||.:|:........|.||||  ||:|.....:||||:|:..|||||||.:||.||.
  Rat   381 N-----FSSCSAEDFEKLTLNKGGSCLLNIPKPDEAYSAPSCGNKLVDPGEECDCGTPKECELDP 440

  Fly   506 CCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPC 570
            ||:|.||||||.|:||.|.||..|:..|...:||...:|||:||||:|....||.|||.:||.||
  Rat   441 CCEGSTCKLKSFAECAYGDCCKDCQFLPGGSMCRGKTSECDVPEYCNGSSQFCPPDVFIQNGYPC 505

  Fly   571 GLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANEHYIKCEP 635
            ..||    .||:.|.|.....||:.|:|....||.|.|:.:.||||...|:|| .:..:|..|..
  Rat   506 WNSK----AYCYNGVCQYYDAQCQVIFGSKAKAAPRDCFIEVNSKGDRFGNCG-VSGSNYKTCAT 565

  Fly   636 ENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTPCG 700
            .|..||.|||::.:..||...:.     .||....:..:|.....|:||: .|:.|:|.:||.|.
  Rat   566 GNALCGKLQCENVQEMPVFGIVP-----AIIQTPSRGTKCWGVDFQLGSD-VPDPGMVNEGTKCD 624

  Fly   701 DNLICLNQTCVSLFPHVDQTKCPANSQGLECSEHGVCTNTNRCFCDMGWGGNDCSSVVLLTTALP 765
            ...||.|..||:  ..|....|  :.|| :|..||||.:...|.|:.||....|.          
  Rat   625 AGKICRNFQCVN--ASVLNYDC--DIQG-KCHGHGVCNSNKNCHCEDGWAPPHCD---------- 674

  Fly   766 TEALPTPENTIKMEKKETPYGTSDQNRISTLTMVIILTVIVKCVFISFA---TLAVCYRRKTTTL 827
                 |......::...|....|...|...|....::..:|...|..|.   .|...:|:|.:.:
  Rat   675 -----TKGYGGSVDSGPTYNAKSTALRDGLLVFFFLIIPLVAAAFFLFIKRDELRKTFRKKRSQM 734

  Fly   828 K------------YDPPYSKKP----------------------IAKSYGGAA-----TAPNHHS 853
            .            .||..|:.|                      :::..||.:     .:|:|.|
  Rat   735 SDGRNQANASRPPGDPSVSRPPGGPSVSRPPGGPNVSRPPGGPNVSRPPGGPSVSRPPVSPHHVS 799

  Fly   854 VEEVSLDG-----------SSKLVYANQTGFR--DKG-IHGRRYTTCGEDDQSHAEKGILKKHGY 904
            ....|.|.           ||.:....|||.|  .:| .|......|..|.|...:|..::    
  Rat   800 PVTPSRDAIRFIKNCLLLCSSVVHLKTQTGARRVSRGDTHPYCAYNCRFDLQFQIQKRKIQ---- 860

  Fly   905 GLVHGEQLKDKWGDDNQSDNLELITQDGTLASTSGGAAASEVERTLKSL 953
                      ||......||.       .|.:..||   .::|.|.:.|
  Rat   861 ----------KWLHSLNLDNY-------MLGNIEGG---PQIEGTSRGL 889

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 29/109 (27%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 73/208 (35%)
Disintegrin 488..561 CDD:459709 40/72 (56%)
ACR 566..713 CDD:214743 52/146 (36%)
Adam9XP_063131318.1 None

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