DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam1b

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_742123.2 Gene:Adam1b / 280667 MGIID:2429506 Length:806 Species:Mus musculus


Alignment Length:914 Identity:225/914 - (24%)
Similarity:366/914 - (40%) Gaps:197/914 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ESPVGEVERLLKEYRQNQELVRRIGGHYYQIIYPVQLRHHEKMGISTREVSLPKPGQRPRPHDDS 101
            :.|.|:|..:|....|.|.|...:.|||.:..:||...|:   ||..:|:               
Mouse    57 KDPGGKVSYMLLMQGQKQLLHLEVKGHYPENNFPVYSYHN---GILRQEM--------------- 103

  Fly   102 GFNRGRTKKHFHRTSLLIKAFNHKFRLDLELNSQLLSPNIQQKHYHVGGYLVDGNRHDIEHCYYH 166
                                             .|||                      :.|:|.
Mouse   104 ---------------------------------PLLS----------------------QDCHYE 113

  Fly   167 GTVKDYPGASAAFHTCNGVSGVIHIGNETFVIHPFYGGDLSKH-PHVIFEARTKANKGCA----- 225
            |.::..||:..:.:.|:|:.||:.....::.|.|...   ||: .||::....:....|:     
Mouse   114 GYMEGVPGSFVSVNICSGLRGVLIKEETSYGIEPMLS---SKNFEHVLYTMEHQPVVSCSVTPKD 175

  Fly   226 NSGNLDSWRLSRRTKHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRNGST 290
            :.|:......||:...|..                 ..|....|||:|..::|:...| :..||.
Mouse   176 SPGDTSHPPRSRKPDDLLV-----------------LTDWWSHTKYVEMFVVVNHQRF-QMWGSN 222

  Fly   291 RAEVIHDAIQVANIADLYFRTLNTRVSVVYIETWGKNQAVIDGSKDISKAISNFNDYTSRNLF-Q 354
            ..|.:...:.:..:|:.:.|.:||.|.:|.:|.|.:... |:...|:...:.|||.:....|. :
Mouse   223 INETVQAVMDIIALANSFTRGINTEVVLVGLEIWTEGDP-IEVPVDLQTTLRNFNFWRQEKLVGR 286

  Fly   355 IERDTTQLLTGETFAGGEAGMAVPETVCTPRAVGISVDVNVYEPHLL-AGTMAHMIGHNIGMGHD 418
            :..|...|:.|.. .|...|.|.....|:.. ...:|:...:|..|| |..|||.:|||:|:.||
Mouse   287 VRHDVAHLIVGHR-PGENEGQAFLRGACSGE-FAAAVEAFHHEDVLLFAALMAHELGHNLGIQHD 349

  Fly   419 DGREECFCRDWHGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLNKP-NEIELRR-- 480
              ...|.|...|.|:|.:.| |:::    .||.||...::..|....|:|||::| .:..:||  
Mouse   350 --HPTCTCGPKHFCLMGEKI-GKDS----GFSNCSSDHFLRFLHDHRGVCLLDEPGRQSRMRRAA 407

  Fly   481 NCGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNEC 545
            ||||.|||:.|:||||:  :|...||||. .||||..:.|::..||.:|..:.:..:||.::..|
Mouse   408 NCGNGVVEDLEQCDCGS--DCDKSQCCDE-NCKLKGNSVCSTELCCFKCNFKKEGDVCRPADGPC 469

  Fly   546 DLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYE 610
            ||.|||:|....||||...::||.|     ..|..||.|.|...:.||..|:|:|..:|...||.
Mouse   470 DLEEYCNGTSAACPSDRKAQDGSKC-----HESFLCFNGQCMDPTFQCSRIFGHGSRSASDYCYT 529

  Fly   611 QFNSKGSINGHCGRDAN--EHYIKCEPENVQCGTLQCKD----GERQPVNDGIDQLYSRTIISIK 669
            ..||:|...|:||..:.  :.|.||..:||.||.|.|.:    .:.||.|         .::.:.
Mouse   530 SLNSRGDQFGNCGSSSQFPKKYTKCSDKNVMCGKLICTEVAFLPQIQPNN---------LLLQVP 585

  Fly   670 GQEFECKATSGQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLECSEH 734
            ..|..|.:.:.....:|..|. .|||.|.||.:.:|.|..|....|.  ...|..:.|   |::|
Mouse   586 ETEDWCWSVAVFDMRDSLHEE-YVKDNTYCGKDKVCKNSICEDFTPF--SFPCSPSKQ---CNKH 644

  Fly   735 GVCTNTNRCFCDMGWGGNDCSS-----------VVLLTTALPTEALPTPENTIKMEKKETPYGTS 788
            |||.:...|.|..|:...||..           .|.|:    .::.|.|.:|          .:|
Mouse   645 GVCNDLGNCHCSFGFAPPDCKEEGTGGSVDSGPAVNLS----NDSSPGPNST----------QSS 695

  Fly   789 DQNRISTLTMVIILTVIVKCVFISFATLAVCYRRKTTTLKYDP-PYSKKPIAKSYGGAATAPNHH 852
            .:..|..|.::::..::|..:.:....:...|.:..|..:..| ...:.|..:........|...
Mouse   696 TEELILNLKLIVLAVILVLMILLIIICIISAYTKSETASEAGPSELEELPEGEKEEQEEVLPEEA 760

  Fly   853 SVEEVSLDGSSKLVYANQTGFRDKGIHGRRYTTCGEDDQSHAEKGILKKHGYGLVHGEQLKDKWG 917
            ..||..|:                  :|:         :...|:|.:::.|....:.|...:|..
Mouse   761 KGEEEELE------------------YGK---------EEAEEQGAVEEEGAEEANEEAAAEKKD 798

  Fly   918 DDNQ 921
            :|.:
Mouse   799 EDEE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 18/110 (16%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 58/202 (29%)
Disintegrin 488..561 CDD:459709 30/72 (42%)
ACR 566..713 CDD:214743 47/152 (31%)
Adam1bNP_742123.2 Pep_M12B_propep 44..159 CDD:460254 34/177 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..188 3/18 (17%)
Reprolysin 203..397 CDD:426256 59/204 (29%)
Disintegrin 415..485 CDD:459709 30/72 (42%)
ACR 489..625 CDD:214743 46/150 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 668..694 5/39 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 735..806 13/95 (14%)

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