DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam6a

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_777479.2 Gene:Adam6a / 238406 MGIID:2676316 Length:754 Species:Mus musculus


Alignment Length:747 Identity:175/747 - (23%)
Similarity:292/747 - (39%) Gaps:133/747 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LNSQLLSPNIQQKHYHVGGYLVD----------GNRHDIE------------------------- 161
            ::|:::.|  :::.||..|....          |.||.|.                         
Mouse    46 ISSEVVIP--RKEIYHTKGLQAQRLLSYSLRFRGQRHIIHLRRKTLIWPRHLLLTTQDDQGALQM 108

  Fly   162 -------HCYYHGTVKDYPGASAAFHTC-NGVSGVIHIGNETFVIHPFYGGDLSKHPHVIFEART 218
                   .|||.|.::....:.....|| .|:||||.:.|.|:.|.|.  .|.....|::.:..:
Mouse   109 EYPFFPVDCYYIGYLEGILQSMVTVDTCYGGLSGVIKLDNLTYEIKPL--NDSQSFEHLVSQIVS 171

  Fly   219 KANKGCANSGNLDSWRLSRRTKHLSAGVAGVVEEILQA-GVGR-NKRDVREATKYIETAIIVDKA 281
            :::    ::|.:::|      ||.|.........:..| |..| :.::.......|:.......:
Mouse   172 ESD----DTGPMNAW------KHWSHNTGSPSSRLEYADGAPRLSSKNYATHPAAIKGHFQATHS 226

  Fly   282 MFDKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVSVVYIETWGKNQAVIDGSKDISKAISNFND 346
            ::....|...:..:....:|.::.|.|...|:.|..|..:..:.:....   |:|........:.
Mouse   227 VYSASGGDKLSSTVEYLFKVISLMDTYLTNLHMRYYVFLMTVYTEADPF---SQDFRVPGGQAHT 288

  Fly   347 YTSRNLFQIERDTTQLLTGETFAGGEAGMAVPETVCTPRAVGISVDVNVYEPHLLAGTMAHMIGH 411
            :..|..:...|.....:..:...|.:|......::|:|.|: |.:..:...|..|:..:.:.:|.
Mouse   289 FYERVFYAHFRPDAGAIINKNSPGDDAVNPAERSICSPSAL-ICLGQHGRNPLFLSIIITNRVGR 352

  Fly   412 NIGMGHDDGREECFCRDWHGCIMAQSIVGQENVQ-PYKFSECSKKDYIDALRTGHGL-CLLNKP- 473
            ::|:.||:|  .|.|:..:.|||.      :|.| ...||.||..:..:.|.|...: ||.... 
Mouse   353 SLGLKHDEG--YCICQRRNTCIMF------KNPQLTDAFSNCSLAEISNILNTPDLMPCLFYDRH 409

  Fly   474 ---NEIELRRNCGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCDQCRLRPKD 535
               |.....:.|||..|:.:|:||||:.:.|..|.|| |..|:|...:.|....||..|...|..
Mouse   410 VYYNTSLTYKFCGNFKVDNNEQCDCGSQKACYSDPCC-GNDCRLTPGSICDKELCCANCTYSPSG 473

  Fly   536 YICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYG 600
            .:||...|.|||||||.|....||.|.:.::|:||     ...|||::|.|...::||..|:|..
Mouse   474 TLCRPIQNICDLPEYCSGSKFICPDDTYLQDGTPC-----SEEGYCYKGNCTDRNIQCMEIFGVS 533

  Fly   601 GSAADRQCYEQFNSKGSINGHCGRDANEH--YIKCEPENVQCGTLQCKDGERQP-VNDGIDQLYS 662
            ...|:.:||: .|.:....|||.| |.|.  :..|..::..||.|||.:....| :.:.:.  :.
Mouse   534 AKNANIKCYD-INKQRFRFGHCTR-AEESLTFNACADQDKLCGRLQCTNVTNLPFLQEHVS--FH 594

  Fly   663 RTIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQ 727
            :::||    ...|.......|:.: .:.|||:.||||.....|....|......:.....|.   
Mouse   595 QSVIS----GVTCFGLDEHRGTET-ADAGLVRHGTPCSRGKFCDRGACNGSLSRLGYDCTPE--- 651

  Fly   728 GLECSEHGVCTNTNRCFCDMGWGGNDCSSVVLLTTALPTEALPTPENTIKMEKKETPYGTSD--- 789
              :|:..|||.|...|.|..||....|                         |:|...|:.|   
Mouse   652 --KCNFRGVCNNRRNCHCHFGWSPPKC-------------------------KEEGHSGSIDSGS 689

  Fly   790 ---QNRI--STLTMVIILTVIVKCVFISFATL 816
               |.||  ..|..|:.|.::...::..|..|
Mouse   690 PPVQRRIIKQNLEPVVYLRILFGRIYFLFVAL 721

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 26/123 (21%)
Reprolysin 270..473 CDD:279729 40/204 (20%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 40/202 (20%)
Disintegrin 488..562 CDD:278623 30/73 (41%)
ACR 566..713 CDD:214743 42/149 (28%)
Adam6aNP_777479.2 Pep_M12B_propep 69..166 CDD:279848 21/98 (21%)
ZnMc_adamalysin_II_like 217..406 CDD:239797 40/200 (20%)
Disintegrin 427..500 CDD:278623 30/73 (41%)
ACR 503..638 CDD:214743 41/148 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836143
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3607
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11905
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X50
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.850

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