DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam23

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_035910.1 Gene:Adam23 / 23792 MGIID:1345162 Length:829 Species:Mus musculus


Alignment Length:727 Identity:236/727 - (32%)
Similarity:352/727 - (48%) Gaps:96/727 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 HFHRTSLLIKAFNHKFRLDLELNSQLLSPNIQQKHYHVGG--YLVDGNRHDIEHCYYHGTVKDYP 173
            |..:.|..|:||..||.|||.||:.|||.:..:.||..|.  |...|     |||||||:::...
Mouse   144 HLAQASFQIEAFGSKFILDLTLNNGLLSSDYVEIHYEDGKQMYSKGG-----EHCYYHGSIRGVK 203

  Fly   174 GASAAFHTCNGVSGVIHIGNETFVIHPFYGGDLSK---HPHVIFEA----RTKANKGCANSGNLD 231
            .:..|..||||:.|:.......::|.|....|..|   .||:|.:.    .:|..|..:..|: |
Mouse   204 DSRVALSTCNGLHGMFEDDTFVYMIEPLELTDDEKSTGRPHIIQKTLAGQYSKQMKNLSTDGS-D 267

  Fly   232 SWRL------SRRTKHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRNGST 290
            .|.|      .||.|.......||.||:                ||:|..|:.|...: |::.|:
Mouse   268 QWPLLPELQWLRRRKRAVNPSRGVFEEM----------------KYLELMIVNDHKTY-KKHRSS 315

  Fly   291 RAEVIHDAIQVANIAD-LYFRTLNTRVSVVYIETWGKNQAVIDGSKDIS----KAISNFNDYTSR 350
            .|...:.|..|.|:.| :|...|||||.:|.:|||.:...:     ||:    :.:.:|:.|..|
Mouse   316 HAHTNNFAKSVVNLVDSIYKEQLNTRVVLVAVETWTEKDHI-----DITINPVQMLHDFSKYRQR 375

  Fly   351 NLFQIERDTTQLLTGETFAGGEAGMAVPETVCTP-RAVGISVDVNVYE-PHLLAGTMAHMIGHNI 413
              .:...|...|::..||....:.::....||:. |.||    ||.|. |..:|..::..:..|:
Mouse   376 --IKQHADAVHLISRVTFHYKRSSLSYFGGVCSRIRGVG----VNEYGLPMAVAQVLSQSLAQNL 434

  Fly   414 GMGHDDG--REECFC-RDWHGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLNKPNE 475
            |:..:..  :.:|.| ..|.||||.::.|....    |||:||..:|.|.|:.|.|.||.|:|.:
Mouse   435 GIQWEPSSRKPKCECIESWGGCIMEETGVSHSR----KFSKCSILEYRDFLQRGGGACLFNRPTK 495

  Fly   476 IELRRNCGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCD--QCRLRPKDYIC 538
            :.....|||..||..||||||...|| ...||.  .|.|.:.|.|:.|.||:  .|..:.:.|.|
Mouse   496 LFEPTECGNGYVEAGEECDCGFHVEC-YGVCCK--KCSLSNGAHCSDGPCCNNTSCLFQSRGYEC 557

  Fly   539 RDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSA 603
            ||:.|.||:.|||.|:.||||.::.|::|..|..::    |.|:.|.|.|...||:.|||...:.
Mouse   558 RDAVNSCDITEYCTGDSGQCPPNLHKQDGYSCNQNQ----GRCYNGECKTRDNQCQYIWGTKAAG 618

  Fly   604 ADRQCYEQFNSKGSINGHCGRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISI 668
            :|:.|||:.|::|:..|:||:| .:.:|.|...:|.||.|.|.:..|.|   .|.||....|.:.
Mouse   619 SDKFCYEKLNTEGTEKGNCGKD-GDRWIPCSKHDVFCGFLLCTNLTRAP---RIGQLQGEIIPTS 679

  Fly   669 ---KGQEFECKATSGQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLE 730
               :|:..:|  :...|..:...:.|.|:||||||.:::||::.|:.: ..::.:.||.:|:|..
Mouse   680 FYHQGRVIDC--SGAHVVLDDDTDVGYVEDGTPCGPSMMCLDRKCLQI-QALNMSSCPLDSRGKV 741

  Fly   731 CSEHGVCTNTNRCFCDMGWGGNDCSSVVLLTTALPTEALPTPENTIKMEKKETPYGTSDQNR-IS 794
            ||.||||:|...|.||..|.|.|||             :..|.......|.|.|.|.|..|. |.
Mouse   742 CSGHGVCSNEATCICDFTWAGTDCS-------------IRDPVRNPNPPKDEGPKGPSATNLIIG 793

  Fly   795 TLTMVIILTVIV 806
            ::...|::..||
Mouse   794 SIAGAILVAAIV 805

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 39/107 (36%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 63/210 (30%)
Disintegrin 488..561 CDD:459709 34/74 (46%)
ACR 566..713 CDD:214743 49/149 (33%)
Adam23NP_035910.1 Pep_M12B_propep 144..246 CDD:460254 39/106 (37%)
Reprolysin 296..493 CDD:426256 64/212 (30%)
Disintegrin 508..580 CDD:459709 34/74 (46%)
ACR 584..723 CDD:214743 48/148 (32%)

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