DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and unc-71

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_499680.1 Gene:unc-71 / 176706 WormBaseID:WBGene00006804 Length:1042 Species:Caenorhabditis elegans


Alignment Length:1089 Identity:313/1089 - (28%)
Similarity:479/1089 - (43%) Gaps:192/1089 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 VGEVERLLKEYRQNQELVRRIGGHYYQIIYPVQLR-HHEKMGISTREVSLPKPGQRPRPHDDSGF 103
            :|:|:  :::...|:..:..:....|::::|.|:| .:|::||.||...|               
 Worm    22 LGKVD--IRQTTANKAFMETMRADGYEVVHPFQIRDKNERIGIDTRNYFL--------------- 69

  Fly   104 NRGRTKKHFHRTSLLIKAFNH--KFRLDLELNSQLLSPNIQQKHYH---VGGYLVDGNRHDIEHC 163
               :.::|:...:::|:: |.  :.:|.||.|:.:.   :.|..:|   ..|..|..||  :|:|
 Worm    70 ---KAQEHYSHVTIVIRS-NQLGRLKLVLERNNFIF---LNQTAFHKLDADGERVIQNR--VENC 125

  Fly   164 YYHGTVKDYPGASAAFHTCNGVSGVIHIGN-ETFVIHPFYGGDLS--KHPHVIFEARTKANKGCA 225
            ||.|||.....:..|..:|||:.|||...| .||.|.|..|||.:  :|||:::::.......|.
 Worm   126 YYQGTVGGEESSFVALSSCNGLRGVISFANGTTFGIWPLDGGDRNSRRHPHILYKSEWSQEAKCG 190

  Fly   226 NS-----GNLDSWRLSRRTKHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDK 285
            :|     |.      .|..||:....:...|.       ..||||.:.|||:|.|:|.|.. |.|
 Worm   191 SSMAHAVGQ------RRMKKHVHKHRSHHHEH-------NKKRDVSKRTKYVEVALIADYE-FMK 241

  Fly   286 RNGSTRAEVIHDAIQVANIAD-LYFRTLNTRVSVVYIETWGKNQAVIDGSKDISKAISNFNDYTS 349
            ..|....:.|...::..|||| :..|.||.|:|.||:|.|...|. ||..:||.:.:|...||.|
 Worm   242 ARGLHDLDAISYMLESLNIADSMLSRDLNIRLSAVYVELWTDVQR-IDLWEDIERTLSGVVDYAS 305

  Fly   350 RNLFQIERDTTQLLTGETFAGGEAGMAVPETVCTPRAVGISVDVNVYEPHLLAGTMAHMIGHNIG 414
            .:::.|::|.:.|.|..:||..|...|...::||.|:..|...|..:..|.....:|..|||.:|
 Worm   306 GHIYHIQKDASILFTAGSFANQEVSNAAIRSICTARSAVIVKGVEQFATHWNGELLAQSIGHLLG 370

  Fly   415 MGHDDGREECFCRDWHGCIMAQ--SIVGQENVQPY--KFSECSKKDYIDALRTGHGLCLLNKPNE 475
            :.||  ...|.|.....|:|.|  ..||.....|:  :||:||........:.|:..||||||.:
 Worm   371 LEHD--TTACSCEPSPECVMRQQPGRVGGGGGSPFSWQFSKCSVARMHGIWQDGNIQCLLNKPFQ 433

  Fly   476 IELRRNCGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCAS-GACCDQCRLRPKDYICR 539
            :...|.|||.||:..||||||:.|.|. |.|||.:||.|:..||||: ..||.:|.||.....||
 Worm   434 VSELRECGNGVVDGSEECDCGSRENCQ-DPCCDPLTCTLRPHAQCAAHHKCCHRCELRKAGDTCR 497

  Fly   540 DSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAA 604
            .|.:.||:.|.|||:.|.||.|....:|:.|     |..|.|::|.|.....||:.:||.....|
 Worm   498 SSKSPCDVAEQCDGKSGDCPPDGHLIDGTVC-----GTDGQCWRGNCSDSHQQCQKLWGREARVA 557

  Fly   605 DRQCYEQFNSKGSINGHCG-RDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISI 668
            :..|:|| |:||:...:|| |.|:..|..|:.|:.:||||.|..|...|::.           |:
 Worm   558 EPVCFEQ-NTKGAEYANCGQRQADGTYHPCQIEDTRCGTLHCHSGSITPIDS-----------SL 610

  Fly   669 KGQEFECKATSGQVGSNSYPEH--GLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLEC 731
            |...|.....|.|:...|....  ||..|||.|....:|:..:||.:......|.||.|:..|.|
 Worm   611 KAFTFHFTENSHQIQCKSIASAAVGLTSDGTNCASGRVCVAGSCVEMSSVSSATACPTNNLALLC 675

  Fly   732 SEHGVCTNTNRCFCDMGWGGNDC-----SSVVLLTTALPTEALPTPENTIKMEKKET---PY--- 785
            |.||.||.|.||.|..||.|..|     ||....:.....|.  :..::.|..:::|   |:   
 Worm   676 SGHGHCTTTARCVCFNGWSGVACDIRSNSSTYQGSMGFGEEG--SGGSSQKSSERKTIMIPHLNI 738

  Fly   786 GTSDQNRISTLTMVIILTVIVKCVFISFATLAVCYRRKTTTLKYDPPYSKKPIAKSYGGAATAPN 850
            ||:    :.|.|:..||......:.:....|.:||||: :.::...|..:|              
 Worm   739 GTT----LETATLFAILLGFGVFLLLCLVCLMLCYRRR-SVVEIPKPSDEK-------------- 784

  Fly   851 HHSVEEVSLDGSSKLVYANQTGFRD--------KGIHG--RRYTTCGEDDQSH---------AEK 896
                :|.|.|...|  :.|...:|:        |.|:|  .|.|...|.|.:.         :::
 Worm   785 ----DEESPDRQIK--FGNMPSYREEKRKRKSNKKIYGALNRITEADERDSTSLRSRDSAGGSQQ 843

  Fly   897 GILKKHGYGLVHGEQLKDKWGDDN---QSDNLEL------ITQDGTLASTSGGAAASEVERTLKS 952
            .:.:::|..:|.| .::|.:..::   :|.:..|      |..||:....|.|:..|....:..|
 Worm   844 LVDRRNGAPVVVG-GIRDPYAGEHIYAESSSNHLTRQFRGINSDGSYPLRSFGSWRSSAPISPAS 907

  Fly   953 LNGYHEDILEALRNAATHRGTGTGNTPVGSGSLSEEMLRKTLQDCNNSQLGYSAEQYKRNIGSKS 1017
            .:|...|:             .|..||:....:.:.:  ||||..:.|...:|..|         
 Worm   908 SSGQLTDV-------------STATTPLRLNKIGKFL--KTLQSDDESPSPFSDHQ--------- 948

  Fly  1018 SSRENICDNAAVHAIILDGSGGGLGGMGLGSSVGAGGGSTSMSGGMPGH 1066
            |....|            |.|..|..|..|     |||...:|.....|
 Worm   949 SFTTGI------------GIGARLEQMQFG-----GGGDEELSAVEADH 980

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 38/114 (33%)
Reprolysin 270..473 CDD:279729 70/207 (34%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 68/205 (33%)
Disintegrin 488..562 CDD:278623 36/74 (49%)
ACR 566..713 CDD:214743 47/149 (32%)
unc-71NP_499680.1 Pep_M12B_propep 46..179 CDD:307618 47/156 (30%)
ZnMc_adamalysin_II_like 227..429 CDD:239797 68/205 (33%)
DISIN 446..521 CDD:214490 37/75 (49%)
ACR 524..657 CDD:214743 47/149 (32%)
EGF_2 666..698 CDD:285248 17/31 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166454
Domainoid 1 1.000 102 1.000 Domainoid score I4297
eggNOG 1 0.900 - - E1_KOG3607
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 366 1.000 Inparanoid score I1254
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - oto20091
orthoMCL 1 0.900 - - OOG6_103986
Panther 1 1.100 - - O PTHR11905
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4147
SonicParanoid 1 1.000 - - X50
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1110.830

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