DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and Adam4

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_033750.1 Gene:Adam4 / 11498 MGIID:104731 Length:763 Species:Mus musculus


Alignment Length:811 Identity:218/811 - (26%)
Similarity:327/811 - (40%) Gaps:169/811 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 RHHEKMGISTREVSLP-KPGQRPRPHDDSGFNRGRTKKHFHRTSLLIKAFNHKFR-----LDLEL 132
            |...|...||.|:.:| |..||....|.||          |.|      ::.:||     :.::|
Mouse    35 RSPPKWRFSTSEIVIPRKVPQRMGKSDMSG----------HIT------YSMRFRGQRHVVHMKL 83

  Fly   133 NSQLLSPNI----------QQKHYHVGGYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTC-NGVS 186
            ...::..|.          |||.|....          ..||::..::..||:.|...|| .|:.
Mouse    84 KKNMIPQNFPVYTSNDQGAQQKDYPFVP----------RDCYFYSFLEGVPGSQAILDTCTGGLK 138

  Fly   187 GVIHIGNETFVIHPFYGGDLSKHPHVI----FEARTKANKGCANSGNLDSWRLSRRTKHLSAGVA 247
            |:|.:.:.|:.|.|.  ...||..|||    .:.|::.:|.|.|.             .:.|...
Mouse   139 GMIQVDDFTYEIKPL--ASSSKFEHVISLLVVDERSRESKKCRND-------------EIMAKAG 188

  Fly   248 GVVEEILQAGVGRNKRDVREATKY----------IETAIIVDKAMFDKRNGSTRAEVIHDAIQVA 302
            .:.||...||      ..|.|..|          |...:..|.......|.||..|:|   :.:.
Mouse   189 DLSEETKLAG------SPRAAPVYLWRYHLKSVGIHYTVTHDLFKQTGSNSSTSVELI---LIMN 244

  Fly   303 NIADLYFRTLNTRVSVVYIETWG-KNQAVIDGSK---DISKAISNFNDYTSRNLFQIERDTTQLL 363
            :|:|..::.....|....:..|. ||...:.|..   |....::.|..:.|:.|..:...|..||
Mouse   245 SISDSIYKISGLIVYARGVWIWNTKNLHTVPGENPHLDPWSVMAGFGVWKSKELHDLYATTAILL 309

  Fly   364 TGE-------TFAGGEAGMAVPETVCTPRAVGISVDVNVYEPHL-LAGT-MAHMIGHNIGMGHDD 419
            ...       :|..|         :|.|. .|: :...|.:.|| |||: :||.:||.:.:.||.
Mouse   310 ASRPKNTDYGSFQNG---------LCNPN-WGV-LFTYVGKNHLFLAGSFLAHAVGHLLDVSHDT 363

  Fly   420 GREECFCRDWHGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGL--CL---LNKPNEIELR 479
            ....||.|.  .|:|.:.....:.:     |.||   :.:..|..|..  ||   |....|:.:.
Mouse   364 PGCVCFRRS--SCLMDEFPTLHDMI-----SNCS---HNELHRRIHDWDPCLSLELKTAKEVNMY 418

  Fly   480 R--NCGNKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSN 542
            .  .||||.||..|:||||:.::|..|:||: :.|:....:.||:|.||..|:..|...||||.|
Mouse   419 EVPRCGNKRVEASEKCDCGSVKDCTTDKCCE-VNCEFTQGSSCAAGGCCLSCKFAPTGTICRDKN 482

  Fly   543 NECDLPEYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQ 607
            ..|||||||.|....||.:.:..:|:||  |...:   |..|.|....|||:|::||........
Mouse   483 GICDLPEYCSGASEHCPGNFYIMDGTPC--SPLAV---CIAGNCSDRHLQCQALFGYQVKDGSPA 542

  Fly   608 CYEQFNSKGSINGHCG----RDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQL-------- 660
            ||.:.|.||...|:||    |..::. :.|:.|:|.||.:.|         ||:..:        
Mouse   543 CYNELNVKGDRFGNCGIRIIRGGSQP-VPCQKEDVFCGMIHC---------DGVSHIPGGGEHTT 597

  Fly   661 -YSRTIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPA 724
             |...:..:|  |.:|.......|: ..||.|||.||..||....|..|.||: .|.:: ..|..
Mouse   598 FYHLKVQDVK--EEQCFGYDAHHGT-ELPEMGLVVDGATCGPGKYCKAQRCVA-HPTLN-FNCNI 657

  Fly   725 NSQGLECSEHGVCTNTNRCFCDMGWGGNDCSSVVLLTTALPTEALPTPENTIKMEKKETPYGTSD 789
            :|    |:..|||.|...|.|..||....|   :.:.....|.:.| |..|.|..:.|.....:.
Mouse   658 SS----CNFRGVCNNKGNCHCVRGWQPPHC---LQIGKGGSTNSGP-PPTTQKKHQAEIHVSANR 714

  Fly   790 QNRISTLTMVIILTVIV-----KCVFISFAT 815
            ...|.::.|::||..|:     |.:|:|..|
Mouse   715 LIVILSIRMILILASILLGAVFKAIFVSETT 745

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 28/129 (22%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 51/228 (22%)
Disintegrin 488..561 CDD:459709 33/72 (46%)
ACR 566..713 CDD:214743 48/159 (30%)
Adam4NP_033750.1 Pep_M12B_propep 46..163 CDD:460254 34/144 (24%)
ZnMc_adamalysin_II_like 213..406 CDD:239797 49/216 (23%)
DISIN 429..503 CDD:214490 33/74 (45%)
ACR 505..648 CDD:214743 48/161 (30%)

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