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Protein Alignment mmd and LOC102550654
DIOPT Version :9
Sequence 1: | NP_001285311.1 |
Gene: | mmd / 32561 |
FlyBaseID: | FBgn0259110 |
Length: | 1484 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_008769029.1 |
Gene: | LOC102550654 / 102550654 |
RGDID: | 7726377 |
Length: | 193 |
Species: | Rattus norvegicus |
Alignment Length: | 118 |
Identity: | 36/118 - (30%) |
Similarity: | 50/118 - (42%) |
Gaps: | 20/118 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 537 ICRDSNNECDLPEYCDGE----------IGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSL 591
:||...:||||||.|||| :|...|.:.|:......:| ...|..|..| |.|
Rat 14 VCRAEKDECDLPEMCDGEVLQEGEVKEAVGYIVSQIRKQKKMKPRMS-PAFSFLCSLG----LQL 73
Fly 592 QCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANEHYIKCEPENVQCGTLQ 644
..:||.......|::.||:| |..||..|:|..:...|. |...:|..:|
Rat 74 MDDAIQTQETKVANKSCYKQ-NEGGSKYGYCHVENGTHM----PCKAKCALMQ 121
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D162519at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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