DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and adam28.4

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_031754080.1 Gene:adam28.4 / 101735040 XenbaseID:XB-GENE-22167138 Length:819 Species:Xenopus tropicalis


Alignment Length:708 Identity:221/708 - (31%)
Similarity:338/708 - (47%) Gaps:110/708 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 YQIIYPVQLRHHEKMGISTREVSLPKPGQRP---RPHDDSGFNRGRTK------------KHFHR 114
            |:|:||..|:..|....:    |.|..|.||   .||...||..|..:            ||.|.
 Frog    30 YEIVYPQILQAQENQAFT----SAPLEGHRPGLHHPHPPKGFTFGPPRNRRPGVHPRHPPKHRHP 90

  Fly   115 TSLLIKAFNHKFRLDLELNSQLLSPNIQQ------KHYHVGGYLVDGNRHDI-----EHCYYHGT 168
            ..|         :.:|:|:::.|..::::      :.|....||.||....|     :||||.|.
 Frog    91 RML---------QYELQLDNKPLVLHLEKTEDLFFRDYTETRYLQDGTPTTISPVIKDHCYYQGR 146

  Fly   169 VKDYPGASAAFHTCNGVSGVIHIGNETFVIHPFYGGDLSKHPHVIFEARTKANKGCA---NSGNL 230
            |.:.|.:..:..||||:.|:|......|:|.|....|..:|....:|.:..:...|.   |:|..
 Frog   147 VMNDPDSLVSLSTCNGLRGIITTKGRHFLIEPLSASDSEEHALYPYEPQEVSPTSCGVTYNNGGE 211

  Fly   231 DSWRLSRRTKHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRNGSTRAEVI 295
            |.:|      .:|:..|...::||     |:|       ||::..::.|.:|:.|.|||  .|.|
 Frog   212 DEFR------KMSSSFANQEDKIL-----RSK-------KYVQLYVVADNSMYLKYNGS--KETI 256

  Fly   296 HDAI-QVANIADLYFRTLNTRVSVVYIETW--GKNQAVIDGSKDISKAISNFNDYTSRNLF-QIE 356
            ...| ::.|..::.::.||...::..||.|  |...|::..||   ..::.|:.:..:.|. :.:
 Frog   257 KQRIYEMVNYVNMVYKPLNVFAALCGIEIWDQGDQIAMLTNSK---VNLARFSAWREKVLLPRKQ 318

  Fly   357 RDTTQLLTGETFAGGEAGMAVPETVC-TPRAVGISVDVNVYEPHLLAGTMAHMIGHNIGMGHDDG 420
            .|..||:|...|.|...|:|....:| |.::.|:..|.|... .:|..|.||.:||::||.||. 
 Frog   319 NDLAQLITNINFDGPVVGIAYIGMICSTTQSAGVLQDHNKLS-IILGATSAHEMGHSLGMYHDG- 381

  Fly   421 REECFCRDWHGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLNKPNEIELRRN--CG 483
             :.|.|...: |:|:..:   .:..|..||.||..::.:.|......||.:.|::..:...  ||
 Frog   382 -KACACNKVY-CLMSTKL---SSWVPNTFSTCSINNFQEFLLNTRPTCLGDIPDKTNILTPPVCG 441

  Fly   484 NKVVEEDEECDCGTFEECALDQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLP 548
            ||..|..|:|||||.:||. |||||..|||||..||||.|.||..|:::....:||:.|::|||.
 Frog   442 NKFTEMGEDCDCGTVQECK-DQCCDAATCKLKPGAQCAEGECCSNCKIKAAGEVCRERNDDCDLE 505

  Fly   549 EYCDGEIGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFN 613
            :.|||....||||.|:.||:|||..:    |||:.|.|||:..||.::||......:..|:.: |
 Frog   506 DVCDGTSPWCPSDRFQANGAPCGKGE----GYCYNGTCPTMQRQCTSLWGENTLVGEDLCFNK-N 565

  Fly   614 SKGSINGHCGRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKAT 678
            .:|:..||| ::....||.|:||||.||.|.|....:.|...|        .:::.|   ||||.
 Frog   566 MEGTDYGHC-KNVGSTYIPCKPENVMCGVLYCNSDNKYPTVPG--------RVAVTG---ECKAL 618

  Fly   679 SGQVGSNSYPEHGLVKDGTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLECSEHGV 736
            ..       || |:|::|..|||..:|.|..|||:......:.|..     :||.:||
 Frog   619 LA-------PE-GMVQNGIKCGDGKVCYNNECVSVETAFGLSGCEG-----KCSGNGV 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 32/132 (24%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 58/205 (28%)
Disintegrin 488..561 CDD:459709 38/72 (53%)
ACR 566..713 CDD:214743 52/146 (36%)
adam28.4XP_031754080.1 Pep_M12B_propep 79..190 CDD:460254 31/119 (26%)
ZnMc_adamalysin_II_like 233..425 CDD:239797 56/203 (28%)
Disintegrin 446..518 CDD:459709 38/72 (53%)
ACR 522..645 CDD:214743 52/147 (35%)
Disintegrin 702..775 CDD:459709
ADAM_CR 779..>808 CDD:472809
Blue background indicates that the domain is not in the aligned region.

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