DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and adam28.3

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:XP_031755156.1 Gene:adam28.3 / 100498252 XenbaseID:XB-GENE-22167131 Length:674 Species:Xenopus tropicalis


Alignment Length:679 Identity:196/679 - (28%)
Similarity:311/679 - (45%) Gaps:91/679 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 NHKFRLDLELNSQLLSPNIQQKHYHVGGYLVDGNRHDIEH-CYYHGTVKDYPGASAAFHTCNGVS 186
            |....|.||....|:..:..:..|...| :...||.:::. |.|.|.||..|.:..:..||||:|
 Frog    62 NRPLVLHLEKTEGLIHNDFTETRYQQDG-MRTTNRPEVKDLCLYQGQVKGDPHSLVSLSTCNGLS 125

  Fly   187 GVIHIGNETFVIHPFYGGDLSKHPHVIFEARTKANKGC-ANSGNLDSWRLSRRTKHLSAGVAGVV 250
            |.|.....||:|.|....|..:|....::.:...:|.| ..|.|:.....:         .|...
 Frog   126 GSIMTQGHTFLIEPLKETDSEEHAFYEYDPKADTSKACGVTSSNMPEGEFN---------TASYT 181

  Fly   251 EEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRNGSTRAEVIHDAI-QVANIADLYFRTLNT 314
            .::.:      |:::..::||::..::.|.:|..|.|||  .|.|.:.| |:.|..::.::.||.
 Frog   182 MDLTE------KQEILNSSKYVQLYVVADYSMVQKYNGS--VETIKNRIFQMMNYNNMVYKALNV 238

  Fly   315 RVSVVYIETWGKNQAVIDGSKDISKAISNFNDYTSRNLFQIE-RDTTQLLTGETFAGGEAGMAVP 378
            .:::..:|.| :|..........::.:.||:::..:||...: .|....||...|.....|:|..
 Frog   239 FIALCGVEFW-ENGDQFPVPSPANECLGNFSEWRDKNLVPRKLHDAAVFLTNVKFVAPLVGLAYV 302

  Fly   379 ETVCTPR-AVGISVDVNVY--EPHLLAGTMAHMIGHNIGMGHDDGREECFCRDWHGCIMAQSIVG 440
            ..:|..| :.|:   :|.|  |..::|..:||.:|||.||.||.  .:|.|.. ..|||::.:  
 Frog   303 GGMCFGRFSAGV---INDYSKEATIVASIIAHEVGHNFGMNHDS--TDCSCSS-ASCIMSKYV-- 359

  Fly   441 QENVQPYKFSECSKKDYIDALRTGHGLCLLNKPNEIELRRN--CGNKVVEEDEECDCGTFEECAL 503
             ..|.|..||.||...:.:.|.|.:..|:.:.|::.::...  ||||..|..|:|||||.:||. 
 Frog   360 -SPVAPTLFSNCSISAFQNFLLTKNPTCISDIPDKPDILTPPVCGNKFTEVGEDCDCGTVQECK- 422

  Fly   504 DQCCDGITCKLKSEAQCASGACCDQCRLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGS 568
            :.|||..|||.|...||..|.|||.|.::...::||.|..:|||.:.|:|....||||.|:.||.
 Frog   423 NPCCDAATCKKKPNVQCTGGECCDNCMIKAAGHVCRASKGDCDLDDLCNGVSSSCPSDRFRVNGL 487

  Fly   569 PCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANEHYIKC 633
            ||...:    |||:.|.|||:..||.||||...:.:...|: ..|:.|.|.|||.::... |:.|
 Frog   488 PCNNGR----GYCYNGSCPTMLNQCNAIWGVDSAVSGNSCF-NMNTNGVIYGHCKQNGTT-YVPC 546

  Fly   634 EPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPEHGLVKDGTP 698
            ..|::.||.|.|.:|...|       |.|...::...    |||.....|.        |:.|..
 Frog   547 AAEDIMCGVLFCINGTTFP-------LISAPFVTTPA----CKALLSPAGK--------VQSGAK 592

  Fly   699 CGDNLICLNQTCVSL-FPHVDQTKCPANSQGLECSEHGVCTNTNRCFCDMGWGGNDCSSVVLLTT 762
            ||:..:|.|..||:. ..::..:.|.:     :|.::.||.:...|.|..||...:|:  |.:|:
 Frog   593 CGNGKVCSNNQCVTTETAYIGSSGCDS-----KCPKNAVCDHELICQCTKGWVPPNCN--VAVTS 650

  Fly   763 ALPTEALPTPENTIKMEKKETPYGTSDQN 791
            .:                    ..|||||
 Frog   651 GV--------------------ISTSDQN 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 28/91 (31%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 58/205 (28%)
Disintegrin 488..561 CDD:459709 33/72 (46%)
ACR 566..713 CDD:214743 47/146 (32%)
adam28.3XP_031755156.1 Pep_M12B_propep 31..150 CDD:460254 28/88 (32%)
ZnMc_adamalysin_II_like 195..389 CDD:239797 58/205 (28%)
DISIN 408..482 CDD:214490 35/74 (47%)
ACR 485..605 CDD:214743 45/144 (31%)

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