DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and adam23

DIOPT Version :10

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_001233135.1 Gene:adam23 / 100494499 XenbaseID:XB-GENE-988267 Length:815 Species:Xenopus tropicalis


Alignment Length:872 Identity:258/872 - (29%)
Similarity:397/872 - (45%) Gaps:142/872 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LCVFVTSAGE---ADYTLDDSFWNEE--SPVGEVERLLKEYRQNQELVRRIGGHYYQIIYPVQLR 74
            ||:.:.|..:   |..|...|.|||.  |..|   ||.:|.:.:.....|...            
 Frog    32 LCLLLLSCPQHWGALSTQTASHWNETAGSTAG---RLTEEDQSSHNNNSRSDS------------ 81

  Fly    75 HHEKMGISTREVSLP--------KPGQRP------RPHDDSGFNRGRTKKHFHRTSLLIKAFNHK 125
            .|.:.....:|:::|        |..:.|      :..|....|:.   .|..:.|..|:||...
 Frog    82 IHSQNNAIQKEITMPSRLVYYINKESESPYHVLDTKARDQPKHNKA---VHLAQASFQIEAFGST 143

  Fly   126 FRLDLELNSQLLSPNIQQKHYHVG-GYLVDGNRHDIEHCYYHGTVKDYPGASAAFHTCNGVSGVI 189
            |.|||.||:.|||.:..:..|..| ..|..|.    |||||||:::....:..|..||||:.|:.
 Frog   144 FILDLTLNNGLLSLDYSEIEYSDGKPKLTKGG----EHCYYHGSIRGVNNSRVAISTCNGLHGMF 204

  Fly   190 HIGNETFVIHPF---YGGDLSKHPHVIFEARTKANKGCANSGNL--------------DSWRLSR 237
            ..|..|:.|||.   :....:..||:|  .||..::...:..:|              ..|...|
 Frog   205 DDGTYTYTIHPVDITHSSKSTSRPHII--ERTAGSQISVHQDSLAESEEKVNSHKTPPTEWLRKR 267

  Fly   238 RTKHLSAGVAGVVEEILQAGVGRNKRDVREATKYIETAIIVDKAMFDKRNGSTRAEVIHDAIQVA 302
            |.:.|.| ..|:.||:                ||:|..|:.|..|: |::.|:.....:.|..|.
 Frog   268 RKRALPA-PRGIFEEM----------------KYVELMIVNDHQMY-KKHRSSHMYTNNFAKSVV 314

  Fly   303 NIAD-LYFRTLNTRVSVVYIETW-GKNQAVIDGSKDISKAISNFNDYTSRNLFQIERDTTQLLTG 365
            |:.| :|...|||||.:|.:||| .|::..|  |.|..|.:.:|:.|...::.| ..|...||:.
 Frog   315 NLVDSVYKEQLNTRVVLVAVETWTDKDRIPI--SPDPIKMLHDFSKYRQHHIKQ-HADAVHLLSN 376

  Fly   366 ETFAGGEAGMAVPETVCT-PRAVGISVDVNVYEPHL-LAGTMAHMIGHNIGMGHDDG--REECFC 426
            .||....:.|:....||: .|.||    ||.|...| :|..:|..:..|:|:..:..  :.:|.|
 Frog   377 GTFHYKRSSMSYFGGVCSITRGVG----VNEYGLLLSMAQQLAQSLAQNLGIQWEPASRKSKCDC 437

  Fly   427 -RDWHGCIMAQSIVGQENVQPYKFSECSKKDYIDALRTGHGLCLLNKPNEIELRRNCGNKVVEED 490
             .::.||||.::.|....    :||:||..:|.:.|..|.|.||.|:|.::.....|||..||..
 Frog   438 TENFGGCIMEETGVYHSR----RFSKCSIAEYKEFLNRGGGSCLFNRPTKLFEVTECGNGYVEAG 498

  Fly   491 EECDCGTFEECALDQCCDGITCKLKSEAQCASGACCD-QCRLRPKDYICRDSNNECDLPEYCDGE 554
            ||||||...:|..| ||.  .|.|.:.|.|:.|.||: .|...|::|.||.:.||||:.|:|.|:
 Frog   499 EECDCGFRMDCFGD-CCK--KCSLSNGAHCSDGPCCNTSCLFLPREYDCRYAVNECDITEHCTGD 560

  Fly   555 IGQCPSDVFKKNGSPCGLSKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSIN 619
            .||||.::.|::|:.|..::    |.|:.|.|.|...||:.|||...:.:|:.|||:.|::|:..
 Frog   561 SGQCPPNLRKQDGNACDSNQ----GRCYNGECKTRDNQCKHIWGTKAAGSDKFCYEKLNTEGTEK 621

  Fly   620 GHCGRDANEHYIKCEPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGS 684
            |:||:| .:.:|:|...:|.||.|.|.:..:.|....::.....|.|:.:|:..:|  :...|..
 Frog   622 GNCGKD-GDRWIQCSKHDVFCGFLLCANVSKSPRIGKLEGDIPPTYINHQGRVVDC--SGAHVIL 683

  Fly   685 NSYPEHGLVKDGTPCGDNLICLNQTCVSLFPH-VDQTKCPANSQGLECSEHGVCTNTNRCFCDMG 748
            :...:.|.|:||.|||.:::||::.|:.:  | ::.:.||..|.|..||.||||:|...|.|...
 Frog   684 DDETDMGYVEDGAPCGPSMMCLDRKCLPI--HLLNISNCPFGSNGKVCSGHGVCSNEATCICSST 746

  Fly   749 WGGNDCSSVVLLTTALPTEALPTPENTIKMEKKETPYGTSDQNRISTLTMVIILTVIVKCVFISF 813
            |.|.|||                    |...|||.|....|..::|..|     ..::..|..:.
 Frog   747 WAGTDCS--------------------IYDPKKEPPTKKDDLPKVSMAT-----NRLIGAVAGTI 786

  Fly   814 ATLAVCYR------RKTTTLKYDPPYS 834
            ..|.|.:.      ......:|||..|
 Frog   787 LALGVIFGGTGWGIENVKKRRYDPSQS 813

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 104..214 CDD:460254 39/113 (35%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 66/207 (32%)
Disintegrin 488..561 CDD:459709 34/73 (47%)
ACR 566..713 CDD:214743 45/146 (31%)
adam23NP_001233135.1 Pep_M12B_propep 109..231 CDD:460254 41/128 (32%)
Reprolysin 283..481 CDD:426256 67/209 (32%)
Disintegrin 496..567 CDD:459709 34/73 (47%)
ACR 571..712 CDD:214743 45/147 (31%)

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