DRSC/TRiP Functional Genomics Resources

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Protein Alignment mmd and LOC100491788

DIOPT Version :9

Sequence 1:NP_001285311.1 Gene:mmd / 32561 FlyBaseID:FBgn0259110 Length:1484 Species:Drosophila melanogaster
Sequence 2:NP_001265673.1 Gene:LOC100491788 / 100491788 -ID:- Length:725 Species:Xenopus tropicalis


Alignment Length:757 Identity:168/757 - (22%)
Similarity:249/757 - (32%) Gaps:264/757 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 LRHHEKMGISTREVSLPKPGQRPRPHD-DSGFNRGRTKKHFHRTSLLIK--AFNHKFRLDLELNS 134
            |:::|.:....              || |....|.:......:..:.:.  |:..||.|.|..:.
 Frog    35 LKYYENLSFDN--------------HDLDQKHKRSKRASEEEKEPIYLDFFAYKRKFALILRRDL 85

  Fly   135 QLLSPNIQQKHYHVGGYLVDGNRH---DIEHCYYHGTVKDYPGASAAFHTCNG------VSGVIH 190
            .:.:.:.|         :|..||.   ||.. .|.|.:||..|:     .|:|      ..|.|.
 Frog    86 NVFADDFQ---------VVSNNRTLSVDISF-VYSGALKDEFGS-----FCHGSIIDGHFEGFIQ 135

  Fly   191 IGNETFVIHPFYGGDLSKHPHVIFEARTKANKGCANSGNLDSWRLS-RRTKHLSAGVAGVVEEIL 254
            ..|.||.:......:.::..::..|    .:.|.:...::.|:.|: ::.:.|........||.|
 Frog   136 TKNGTFYVEYEKNSNGTEESYIYHE----EDIGYSILKDIKSFELTLKKYQFLEKMKWKAKEEDL 196

  Fly   255 QAGVGRNKRDVREATKYIETAIIVDKA--MFDKRNGSTRAEVIHDAIQVANIADLYFRTLNTRVS 317
            .    |.||.:..:.   .|.::..||  :|.||..|..        ||.:....|.    |.|:
 Frog   197 T----RKKRSLDLSR---TTCLLYLKADYLFYKRFNSIE--------QVISQISSYM----TSVN 242

  Fly   318 VVYIETWGKNQAVIDGSKDISKAISNFNDYTSRNLFQIERDTTQLLTGETFAG------------ 370
            .:|      .||..:|.|||:..|...|        .::.|........||.|            
 Frog   243 AIY------EQANFNGIKDINFKIKTLN--------VVQEDKPSSAMHSTFIGPEKLLMLHSESV 293

  Fly   371 ----------------GEAGMA--------------------VPETVCTPRAVGISVDVNVY--- 396
                            |..|:|                    .|.|..|.. .|| |.:..|   
 Frog   294 WNNYCLSYLITDRDYNGVLGLAWNGRPGNSGGICSKYSQYGENPNTFVTLN-TGI-VTIQKYGQY 356

  Fly   397 -EPHLLAGTMAHMIGHNIGMGHDDGREECFCRDWHGCIMAQSIVGQENVQPY----------KFS 450
             .|.|:..|:||.:||::|..||:. |||...|      ..|..|...:.||          |||
 Frog   357 LPPRLIHITLAHELGHSLGAPHDES-EECARFD------TTSPNGNYLMFPYAMDGNQYNNDKFS 414

  Fly   451 ECSKKDYIDALRTGHGLCLLNKPNEIELRRNCGNKVVEEDEECDCGTFEECALDQCCDG----IT 511
            .||.....:.||.....|.:...     |..|||::|||.|:||.|..:.   |.||.|    :.
 Frog   415 SCSIYYIGNLLRVKKDQCFVESD-----RPTCGNQIVEEGEQCDVGYNDN---DPCCYGAESALQ 471

  Fly   512 CKLKSEAQC--ASGACCDQ-CRLRPKDYICRDSNNECDLPEYCDGEIGQCPSDVFKKNGSPCGL- 572
            |.||...||  :.|.||.. |...||...|:| ..||.|...|.|:..:||..:.|.|.:.|.| 
 Frog   472 CTLKPGKQCSPSQGLCCSHLCSYMPKSQRCQD-EAECTLENNCTGDSAKCPKPLPKSNYTLCNLG 535

  Fly   573 SKTGISGYCFQGYCPTLSLQCEAIWGYGGSAADRQCYEQFNSKGSINGHCGRDANEHYIKC---- 633
            ::..|:|.|.|..|....|:                            .|..|:.....||    
 Frog   536 TRICINGMCRQSVCAKFGLE----------------------------QCDCDSESMLEKCQLCC 572

  Fly   634 -EPENVQCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPEHGLVK--D 695
             ||:||                                  :.||:|. .|....:.:..|::  .
 Frog   573 QEPDNV----------------------------------YSCKSTK-SVELEHFFKRALLQLPP 602

  Fly   696 GTPCGDNLICLNQTCVSLFPHVDQTKCPANSQGLECSEHGVC 737
            |:|||                        |.||. |.:..:|
 Frog   603 GSPCG------------------------NRQGY-CDKFHIC 619

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mmdNP_001285311.1 Pep_M12B_propep 106..213 CDD:279848 23/117 (20%)
Reprolysin 270..473 CDD:279729 61/266 (23%)
ZnMc_adamalysin_II_like 270..471 CDD:239797 61/264 (23%)
Disintegrin 488..562 CDD:278623 30/80 (38%)
ACR 566..713 CDD:214743 26/154 (17%)
LOC100491788NP_001265673.1 Pep_M12B_propep 52..144 CDD:279848 24/106 (23%)
ZnMc 208..439 CDD:294052 61/270 (23%)
Reprolysin_2 227..425 CDD:290307 51/232 (22%)
Disintegrin 447..524 CDD:278623 30/80 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D162519at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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