DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8924 and rib

DIOPT Version :9

Sequence 1:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001261085.1 Gene:rib / 44855 FlyBaseID:FBgn0003254 Length:680 Species:Drosophila melanogaster


Alignment Length:582 Identity:140/582 - (24%)
Similarity:211/582 - (36%) Gaps:137/582 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGAT----------QEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACS 55
            |.|.|          |.:|:|||:|..::......|.....:||.:|..:.:|...||:||||.|
  Fly     1 MGGPTAPVASSGEVGQTYCLRWNNHQTNLVQILHALHEVGSYVDCSLVVDDEQFQAHRVVLAANS 65

  Fly    56 TYFEAILAEHPCKHPVIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGLYGS 120
            .||:.||.:.|..|..|||| .:|.:||.||:.:||.||..||::...::||.|::||::|||.:
  Fly    66 PYFQHILKDVPQDHCSIILP-GVKGFEIAALLQYMYTGETTVTKSQEPEILRTAKELQVKGLYDN 129

  Fly   121 EAPINYKKLQQASLEAAKDPAATTARSFKHVDSAETDDAATNSTTSTTMTTSSAPPLPVNH-QQP 184
            ....|:..:...|...|.........:..|  |:.....:|:.:.|..:::|.:||.|... .||
  Fly   130 LMKFNHASVTPTSSSGAGGAKPQNGSASNH--SSSVISTSTHISPSAAISSSCSPPPPPQFGYQP 192

  Fly   185 TVLKRQNPDARQQQQQQQQQQVQQRPQINGSNAQQPSKATSTNVLGSHSNAPTEDDSGDEVPNN- 248
                     ......|||.....|.|.  |.....|::||      .||.|....::|.:.|.. 
  Fly   193 ---------GYSHYPQQQPMSASQIPA--GEAPLTPTQAT------PHSAASGAGEAGGQWPLTP 240

  Fly   249 ------WNAYGEQFDDCN---------ISAQAVDNKMNVHLSLQQARMQMQLQQQQYLDSNVEDD 298
                  .|:..|...|.|         ||:..:....:..:      ::..|.|....||:....
  Fly   241 SAAAAMLNSVYESAADMNPLKRKKLSAISSMLLSGNRDTPI------LRNVLAQANPADSSQPGP 299

  Fly   299 HN----YVAAHDENNDSSFATGVPCGSGLS-------------------LSLDTD--LDTSANTS 338
            .|    ....|...|     |.:|.|.|:|                   ||..||  .:.....|
  Fly   300 MNANGEKTPTHPHQN-----TQLPAGLGVSGGERNHSFNGSDYGGDKEPLSPYTDRSFEEETGQS 359

  Fly   339 GGLSHSSIDGYTSYKRVRRSEASLAQAAKCVSKGETFQTVSNMFNIPVSTIRFYMARKGI----- 398
            ||....    :..||:..|  |.:..|.:.|.:|.:....|..:.:|..|:...:.:..|     
  Fly   360 GGKKPE----WKRYKQYTR--ADMMCAIQAVREGMSALQASRKYGLPSRTLYDKVRKLNITTGRG 418

  Fly   399 ---LPKR----------------------KRGRGASHAGNIIITTNSGKLSTVPASITHPPAHPH 438
               .|||                      ..|.|..|...:   ....|:..|||....||..|.
  Fly   419 THRTPKRSPPGAESSQGFSYSAAAAAAAHNYGHGHGHHSEV---KRDQKVDHVPAHHGMPPTIPP 480

  Fly   439 IHTNPLPHTQSQQ---------MSMDSLHLKAGIANTSGSNSPATATATSMSPS-FDMATTG 490
            .....|.|...||         ...::||     |....:.:.|.|...|.||: .|..:.|
  Fly   481 SAAALLDHAFLQQALENRGGDMAGREALH-----AMALAAAAHAAANRLSSSPAEMDQRSNG 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8924NP_573091.1 BTB 25..117 CDD:279045 38/91 (42%)
BTB 34..117 CDD:197585 36/82 (44%)
MerR 378..407 CDD:278788 8/58 (14%)
ribNP_001261085.1 BTB 33..133 CDD:279045 41/100 (41%)
BTB 44..133 CDD:197585 39/89 (44%)
HTH_psq 373..417 CDD:283007 9/45 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1229475at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.020

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