DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8924 and lola

DIOPT Version :9

Sequence 1:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_788308.3 Gene:lola / 44548 FlyBaseID:FBgn0283521 Length:970 Species:Drosophila melanogaster


Alignment Length:653 Identity:149/653 - (22%)
Similarity:227/653 - (34%) Gaps:232/653 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 QEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKHP 70
            |:||:|||:|..::.:.|..||..:..||.|||.||:.:..|::||:|||.||..:|.|...|||
  Fly     5 QQFCLRWNNHQSTLISVFDTLLENETLVDCTLAAEGKFLKAHKVVLSACSPYFATLLQEQYDKHP 69

  Fly    71 VIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGL------------------ 117
            :.|| :::|..|::|::|:||:||||::|..|..||:.||.|||:||                  
  Fly    70 IFIL-KDVKYQELRAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSDNRTGGGVAPKPESSGH 133

  Fly   118 ------------------------------------YGSEAPI-NYKKLQQASLE---------- 135
                                                .||.:|. ..:|:::.|:|          
  Fly   134 HRGGKLSGAYTLEQTKRARLATGGAMDTSGDVSGSREGSSSPSRRRRKVRRRSMENDAHDNSNSS 198

  Fly   136 ----AAKD------------------------PAATTARSFKHVDSAE--TDDAATNSTTSTTMT 170
                ||.:                        |||.|:.........:  |....|..|.|..:|
  Fly   199 VLQAAASNQSILQQTGAGLAVSALVTTQLSSGPAAGTSSQASSTQQQQPLTSTNVTKKTESAKLT 263

  Fly   171 TSSAPPLPVNHQQPTVLKRQNPDARQQQQQQQQQQVQQRPQ-INGSNAQQPSKATSTNVLGSHSN 234
            :|:|.|          ....:..|..||....|||.|.... ||..|.|..|:..:..|.|.   
  Fly   264 SSTAAP----------ASGASASAAVQQAHLHQQQAQTTSDAINTENVQAQSQGGAQGVQGD--- 315

  Fly   235 APTED-DSGDEVPNNWNAYGEQFDDCNIS-----------AQAVDNKMNVHLSLQQARMQMQLQQ 287
              .|| |.|..|....:|.|......:.|           |..||...:.|....:......:..
  Fly   316 --DEDIDEGSAVGGPNSATGPNPASASASAVHAGVVVKQLASVVDKSSSNHKHKIKDNSVSSVGS 378

  Fly   288 QQYLDSNVEDDHNYVAAHDENNDSSFATGVPCGSGLSLSLD------TDLDTSANTSGGLSHSSI 346
            :..::...|.|.:   |||||.:             .|:||      .:||.:|.||.| ...|.
  Fly   379 EMVIEPKAEYDDD---AHDENVE-------------DLTLDEEDMTMEELDQTAGTSQG-GEGSS 426

  Fly   347 DGYTSYKRVR-RSEASL---------AQAAKCVSKGETFQTVSNMFN-----IPVSTIRFYMARK 396
            ..|.:::..| :.|..|         .||:| ..|||..:...:.|.     :..:.|.....:.
  Fly   427 QTYATWQHDRSQDELGLMAQDAQQRDPQASK-QDKGEQTEGAQDEFELDDCLLESNDIVITQNKD 490

  Fly   397 G-ILPKRKRGR-----------------------------------------GASHAGN----II 415
            | :|..:|.|.                                         .|||:..    ..
  Fly   491 GFVLHVKKLGNITAAKLEENQAVAQQQGQAAVTVTGPAGQPTPTITELLNAAAASHSEPKPTLTT 555

  Fly   416 ITTNSGKLST-----------VPASITHPPAHPHI------------HTNPLPHTQSQQMSMDSL 457
            :|:...||.:           :||:.|....|||.            |.:..||.|.......::
  Fly   556 LTSTPIKLPSSECELINIKKIIPATTTIATHHPHTSSTIIHPHHIIQHVSQEPHHQEHHQQHQTI 620

  Fly   458 HLK 460
            |::
  Fly   621 HIE 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8924NP_573091.1 BTB 25..117 CDD:279045 43/91 (47%)
BTB 34..117 CDD:197585 40/82 (49%)
MerR 378..407 CDD:278788 6/75 (8%)
lolaNP_788308.3 BTB 22..117 CDD:279045 46/95 (48%)
BTB 33..117 CDD:197585 42/84 (50%)
C2H2 Zn finger 905..925 CDD:275368
C2H2 Zn finger 935..955 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 59 1.000 Domainoid score I10615
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000141
OrthoInspector 1 1.000 - - otm40394
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23110
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
55.010

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