DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8924 and br

DIOPT Version :10

Sequence 1:NP_573091.1 Gene:CG8924 / 32557 FlyBaseID:FBgn0030710 Length:514 Species:Drosophila melanogaster
Sequence 2:NP_001162638.2 Gene:br / 44505 FlyBaseID:FBgn0283451 Length:1011 Species:Drosophila melanogaster


Alignment Length:590 Identity:140/590 - (23%)
Similarity:218/590 - (36%) Gaps:144/590 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TQEFCVRWNSHLGSIGAAFPQLLAGQRFVDVTLACEGQQVHCHRLVLAACSTYFEAILAEHPCKH 69
            ||.||:|||::..||.:||..|...:.||||||||||:.:..||:||:|||.||..:|...||||
  Fly     4 TQHFCLRWNNYQSSITSAFENLRDDEAFVDVTLACEGRSIKAHRVVLSACSPYFRELLKSTPCKH 68

  Fly    70 PVIILPREIKLWEIQALVDFMYKGEVNVTQAGLGQLLRCAEQLQIRGLYGSEAPINYK---KLQQ 131
            |||:| :::...::.|||:|:|.|||||.|..|...|:.||.|::.||...:|...:.   ::|.
  Fly    69 PVILL-QDVNFMDLHALVEFIYHGEVNVHQKSLQSFLKTAEVLRVSGLTQQQAEDTHSHLAQIQN 132

  Fly   132 ASLEAAKDPAATTARSFKHVDSAETDDAATNSTTSTTMTTSSAPPLPV----NHQQPTVLKRQNP 192
            .:....:.|..|..:|..|.......|...:||..:.....|.||..|    :|....:|||...
  Fly   133 LANSGGRTPLNTHTQSLPHPHHGSLHDDGGSSTLFSRQGAGSPPPTAVPSLPSHINNQLLKRMAM 197

  Fly   193 DARQQQQQQQQQQVQQRPQINGSNAQQP-SKATSTNVLGSHSNAP------TEDDSGDEVP---- 246
            ..|.......::......::.||:...| |.|..:   ||::|:|      ....|..:.|    
  Fly   198 MHRSSAAAAAEETSHAFKRLRGSDNSLPLSGAVGS---GSNNNSPDLPPLHARSASPQQTPADFS 259

  Fly   247 -------------------------NNWNAYGEQFDDCNISAQAVDNKMNVHLSLQQARMQMQLQ 286
                                     |:.|..|......|.:..::.:|:........||......
  Fly   260 TIKHHNNNNTPPLKEEKRNGPTGNGNSGNGNGNGNGASNGNGISISDKLGSLTPSPLARAGADDV 324

  Fly   287 QQQYLD-------SNVEDDH--NYVAAHDENNDSSFATGVPCGSGLSLSLDTDLDTSANTSGGLS 342
            :.:.:|       :|..|:|  :....||.|..||       |.|...||          |.|..
  Fly   325 KSEPMDMVCSNNNANANDEHSNDSTGEHDANRSSS-------GDGGKGSL----------SSGND 372

  Fly   343 HSSIDGYTSYKRVRRSEASLAQAAKCVSKGETFQTVSNMFNIPVSTIRFYMARKGILPKRKRGRG 407
            ....||..|:.       :..|.....::.:.|...:  ||.|           .|.|....|..
  Fly   373 EEIGDGLASHH-------AAPQFIMSPAENKMFHAAA--FNFP-----------NIDPSALLGLN 417

  Fly   408 A--SHAGNIIITTNSGKLSTVPASITHP------PAHPHIHTN---------------------- 442
            .  ..:|::.::...|...::.:.:..|      |::...:.|                      
  Fly   418 TQLQQSGDLAVSPQGGSTGSLLSGVIVPGGSGGTPSNSSSNNNNNNSNNQQQKVEQQSSPHQLLQ 482

  Fly   443 ----PLPHTQSQQMSMD------------SLHLKAGIANTSGSNSPATATATSMSPSFDMATTGD 491
                ..|||.|.|:..:            .||:.||...:...:|.....|...|     ||...
  Fly   483 QQHHSTPHTNSPQLKQEQPKSGGGSCKSSDLHIAAGSERSLSRSSQGMPDAGGHS-----ATPSP 542

  Fly   492 IVPFH 496
            ...:|
  Fly   543 TAAYH 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8924NP_573091.1 BTB_POZ_BAB-like 32..116 CDD:349624 44/83 (53%)
MerR 378..407 CDD:425647 6/28 (21%)
brNP_001162638.2 BTB_POZ_BAB-like 31..114 CDD:349624 44/83 (53%)
C2H2 Zn finger 712..729 CDD:275368
C2H2 Zn finger 742..763 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.